RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 TACR2P21452 398 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 FMO4P31512 558 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 PGGT1BP53609 377 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ARSFP54793 590 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 GNA12Q03113 381 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 CAPRIN1Q14444 709 aaKnown RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 RAB39AQ14964 217 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 C16orf72Q14CZ0 275 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 TSNQ15631 228 aaKnown RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 PTPRNQ16849 979 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ALFQ53S48 1182 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ZC3H12BQ5HYM0 836 aaKnown RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 NOMO2Q5JPE7 1267 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 C6orf136Q5SQH8 315 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 CACHD1Q5VU97 1274 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 RAP1GAP2Q684P5 730 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 GDF6Q6KF10 455 aaPredicted RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 KLHL35Q6PF15 583 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 PAQR3Q6TCH7 311 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 SPATA31D4Q6ZUB0 917 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 LYSMD3Q7Z3D4 306 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 CTU1Q7Z7A3 348 aaKnown RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 SYVN1Q86TM6 617 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 RIMKLAQ8IXN7 391 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 FAM126BQ8IXS8 530 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 EID3Q8N140 333 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 CLEC4FQ8N1N0 589 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ELMOD1Q8N336 334 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 PGBD5Q8N414 524 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ZNF513Q8N8E2 541 aaPredicted RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 SETD9Q8NE22 299 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 OR13F1Q8NGS4 319 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 DNAJB14Q8TBM8 379 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 S100ZQ8WXG8 99 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ISG20Q96AZ6 181 aaKnown RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 TMIGD2Q96BF3 282 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 RMDN1Q96DB5 314 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 RNF145Q96MT1 663 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ADAM2Q99965 735 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 SLC39A3Q9BRY0 314 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 SEMA4BQ9NPR2 832 aaPredicted RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 IFT80Q9P2H3 777 aaPredicted RBP10.77□□□□□ -0.69
LCN2-202ENST00000372998 KLHL42Q9P2K6 505 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 SH3GLB1Q9Y371 365 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 AP1M2Q9Y6Q5 423 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 HSPE1-MOB4S4R3N1 261 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 CROCCQ5TZA2 2017 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 FRMPD3Q5JV73 1810 aa10.77□□□□□ -0.69
LCN2-202ENST00000372998 ZFC3H1O60293 1989 aaKnown RBP10.76□□□□□ -0.69
LCN2-202ENST00000372998 GLTPD2A6NH11 291 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 MEIS3P2A8K0S8 358 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 G3V2T6 193 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 H3BMQ9 156 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 STX7O15400 261 aaKnown RBP10.76□□□□□ -0.69
LCN2-202ENST00000372998 SEC14L2O76054 403 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 CNTN5O94779 1100 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 C1RP00736 705 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 IGHA2P01877 340 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 RETP07949 1114 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 TSPAN8P19075 237 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 RPS3P23396 243 aaKnown RBP eCLIP10.76□□□□□ -0.69
LCN2-202ENST00000372998 EEF1B2P24534 225 aaKnown RBP10.76□□□□□ -0.69
LCN2-202ENST00000372998 YY1P25490 414 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 CD52P31358 61 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 THPOP40225 353 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 RXRGP48443 463 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 SERPINB10P48595 397 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 GALK1P51570 392 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 PTPN5P54829 565 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 TIAL1Q01085 375 aaKnown RBP eCLIP10.76□□□□□ -0.69
LCN2-202ENST00000372998 CACNG1Q06432 222 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 DSC1Q08554 894 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 ZNF846Q147U1 533 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 ATG9BQ674R7 924 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 GRAMD4Q6IC98 578 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 FAM117BQ6P1L5 589 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 MSANTD1Q6ZTZ1 278 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 ZNF598Q86UK7 904 aaKnown RBP10.76□□□□□ -0.69
LCN2-202ENST00000372998 IFNEQ86WN2 208 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 HIPK1Q86Z02 1210 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 OR4K2Q8NGD2 314 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 OR13C4Q8NGS5 318 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 OR5K1Q8NHB7 308 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 METTL6Q8TCB7 284 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 PLD4Q96BZ4 506 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 TBC1D20Q96BZ9 403 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 CCDC138Q96M89 665 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 COG8Q96MW5 612 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 CGREF1Q99674 301 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 GPR21Q99679 349 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 SLC30A3Q99726 388 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 PAAF1Q9BRP4 392 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 SLC29A3Q9BZD2 475 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 WDR12Q9GZL7 423 aaKnown RBP10.76□□□□□ -0.69
LCN2-202ENST00000372998 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 RMND5AQ9H871 391 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 ANKHQ9HCJ1 492 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 DNMT3LQ9UJW3 386 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 PSME2Q9UL46 239 aa10.76□□□□□ -0.69
LCN2-202ENST00000372998 MAPRE3Q9UPY8 281 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms