RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 BROXQ5VW32 411 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 KANK2Q63ZY3 851 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 FBXL22Q6P050 247 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 PRMT9Q6P2P2 845 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 TBC1D21Q8IYX1 336 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 LPCAT1Q8NF37 534 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 CDC26Q8NHZ8 85 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.96■□□□□ 0.156e-7■■■■□ 24.2
SCARB1-202ENST00000339570 L3HYPDHQ96EM0 354 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 LINGO1Q96FE5 620 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 ATOH8Q96SQ7 321 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 MFSD1Q9H3U5 465 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 LEF1Q9UJU2 399 aaPredicted RBP15.96■□□□□ 0.15
SCARB1-202ENST00000339570 SPO11Q9Y5K1 396 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 PTCH2Q9Y6C5 1203 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 SLC30A1Q9Y6M5 507 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 MIA3Q5JRA6 1907 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 SLC12A8A0AV02 714 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 UPK3BL1B0FP48 263 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 UPK3BL2E5RIL1 263 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 FGF10O15520 208 aaPredicted RBP15.96■□□□□ 0.15
SCARB1-202ENST00000339570 SLC7A4O43246 635 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 GPIP06744 558 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 IDUAP35475 653 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 RAD51Q06609 339 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 C8orf59Q8N0T1 100 aaPredicted RBP15.96■□□□□ 0.15
SCARB1-202ENST00000339570 NRBF2Q96F24 287 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 FUNDC2Q9BWH2 189 aa15.96■□□□□ 0.15
SCARB1-202ENST00000339570 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.15
SCARB1-202ENST00000339570 G3V2T6 193 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 F2P00734 622 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 FTH1P02794 183 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 EFNA1P20827 205 aaPredicted RBP15.96■□□□□ 0.14
SCARB1-202ENST00000339570 DCKP27707 260 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 CRYBB1P53674 252 aaPredicted RBP15.96■□□□□ 0.14
SCARB1-202ENST00000339570 MLLT6P55198 1093 aaPredicted RBP15.96■□□□□ 0.14
SCARB1-202ENST00000339570 FRA10AC1Q70Z53 315 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 SLC22A15Q8IZD6 547 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 SLC22A17Q8WUG5 538 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 HPS1Q92902 700 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 CCDC97Q96F63 343 aaPredicted RBP15.96■□□□□ 0.14
SCARB1-202ENST00000339570 TAS2R13Q9NYV9 303 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 FLRT1Q9NZU1 646 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 AFF4Q9UHB7 1163 aaKnown RBP15.96■□□□□ 0.14
SCARB1-202ENST00000339570 ADGRE2Q9UHX3 823 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 PCDHGA11Q9Y5H2 935 aa15.96■□□□□ 0.14
SCARB1-202ENST00000339570 MYADML2A6NDP7 307 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 KDM1AO60341 852 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 CACNG3O60359 315 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 CBFA2T3O75081 653 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 VBP1P61758 197 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 AQP6Q13520 282 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 C6orf136Q5SQH8 315 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 FAM117BQ6P1L5 589 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 GLT6D1Q7Z4J2 308 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 SPRED1Q7Z699 444 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 PIANPQ8IYJ0 282 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 OSCP1Q8WVF1 389 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 FEM1AQ9BSK4 669 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 TDRD1Q9BXT4 1180 aaKnown RBP15.95■□□□□ 0.14
SCARB1-202ENST00000339570 SNX5Q9Y5X3 404 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 PLXNA1Q9UIW2 1896 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 TCRBV5S2A0A599 114 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 SH3BGRLO75368 114 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 FDXRP22570 491 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 MS4A13Q5J8X5 152 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 PSAPL1Q6NUJ1 521 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 SLCO6A1Q86UG4 719 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 PROKR1Q8TCW9 393 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 PTCD2Q8WV60 388 aaKnown RBP15.95■□□□□ 0.14
SCARB1-202ENST00000339570 IRGQQ8WZA9 623 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 ZYG11BQ9C0D3 744 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 NTN4Q9HB63 628 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 FARSBQ9NSD9 589 aaKnown RBP15.95■□□□□ 0.14
SCARB1-202ENST00000339570 INTS10Q9NVR2 710 aaKnown RBP15.95■□□□□ 0.14
SCARB1-202ENST00000339570 HACD3Q9P035 362 aa15.95■□□□□ 0.14
SCARB1-202ENST00000339570 DEAF1O75398 565 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-202ENST00000339570 CAPN15O75808 1086 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 ATXN1LP0C7T5 689 aaKnown RBP15.94■□□□□ 0.14
SCARB1-202ENST00000339570 FCGR1AP12314 374 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 BMP1P13497 986 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 PORP16435 677 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-202ENST00000339570 PSMB9P28065 219 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 HALP42357 657 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 CD97P48960 835 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 POLD2P49005 469 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 HLCSP50747 726 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 VAC14Q08AM6 782 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 KCNAB2Q13303 367 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 NKG7Q16617 165 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 LETMD1Q6P1Q0 360 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 LINGO4Q6UY18 593 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 GPRIN3Q6ZVF9 776 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 TMEM86AQ8N2M4 240 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 TMEM199Q8N511 208 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 OR6K2Q8NGY2 324 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 CDKN2AIPNLQ96HQ2 116 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 ABHD8Q96I13 439 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 KLHL25Q9H0H3 589 aa15.94■□□□□ 0.14
SCARB1-202ENST00000339570 AP5M1Q9H0R1 490 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms