RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TRMT6Q9UJA5 497 aaKnown RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 SARDHQ9UL12 918 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 A0A0U1RQS6 177 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 H0YJX3 145 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 GSTA4O15217 222 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 KPNA6O60684 536 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 ECI2O75521 394 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 ATP6V0D1P61421 351 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 SPIDRQ14159 915 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZNF829Q3KNS6 432 aaPredicted RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 UGT3A2Q3SY77 523 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 AASDHQ4L235 1098 aaPredicted RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 PAGE3Q5JUK9 113 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 TMTC4Q5T4D3 741 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 GALNT18Q6P9A2 607 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 GLB1LQ6UWU2 654 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 ABRAXAS1Q6UWZ7 409 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 TMC5Q6UXY8 1006 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 BPHLQ86WA6 291 aaPredicted RBP16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 LPCAT1Q8NF37 534 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 BRSK1Q8TDC3 778 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 TEX37Q96LM6 180 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 NSMCE2Q96MF7 247 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 FBXO44Q9H4M3 255 aa16.36■□□□□ 0.21
CDC42EP4-201ENST00000335793 SBF1O95248 1867 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 TNFRSF10AO00220 468 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 OR4F21O95013 312 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 SNAP29O95721 258 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 FGF1P05230 155 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 AKR1A1P14550 325 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZNF12P17014 697 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 MAP4P27816 1152 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 PSMD8P48556 350 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 TAF10Q12962 218 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 BTLAQ7Z6A9 289 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 METTL6Q8TCB7 284 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 POLE4Q9NR33 117 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 INTS7Q9NVH2 962 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ARMC1Q9NVT9 282 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ARIH1Q9Y4X5 557 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 LOC285556D6RIA3 1793 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 A0A0D9SEW6 157 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZSCAN5BA6NJL1 495 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 SCAMP3O14828 347 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 MMP2P08253 660 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ITGB6P18564 788 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 HLA-DPA1P20036 260 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 FDXRP22570 491 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 JAK1P23458 1154 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 RPS9P46781 194 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 CDKN1CP49918 316 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 CTXN3Q4LDR2 81 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 SGO1Q5FBB7 561 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZNF280BQ86YH2 543 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 CADM3Q8N126 398 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 DTX3Q8N9I9 347 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ARRDC2Q8TBH0 407 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 SUN5Q8TC36 379 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZUFSPQ96AP4 578 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 BTN2A3PQ96KV6 586 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 AARSD1Q9BTE6 412 aaKnown RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 CINPQ9BW66 212 aaPredicted RBP16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 ZMYM5Q9UJ78 669 aa16.35■□□□□ 0.21
CDC42EP4-201ENST00000335793 SYCE1LA8MT33 242 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 MUSKO15146 869 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 NIPSNAP2O75323 286 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 GUCA1CO95843 209 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 MTHFD2P13995 350 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 PRKACBP22694 351 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 HOXC13P31276 330 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 PBX3P40426 434 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 POLR2JP52435 117 aaKnown RBP16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 NR6A1Q15406 480 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 ATP6AP1LQ52LC2 224 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 BORAQ6PGQ7 559 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 HACD2Q6Y1H2 254 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 MINDY1Q8N5J2 469 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 GIPC2Q8TF65 315 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 SDCCAG3Q96C92 435 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 THUMPD3Q9BV44 507 aaKnown RBP16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 CHID1Q9BWS9 393 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 SMPD3Q9NY59 655 aaPredicted RBP16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 EIF2B4Q9UI10 523 aaKnown RBP16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 PCDHGC4Q9Y5F7 938 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 A0A1W2PP18 115 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 MROH6A6NGR9 719 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 C2orf81A6NN90 581 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 CBX4O00257 560 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 VPS26AO75436 327 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 PEX11BO96011 259 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 ATXN1LP0C7T5 689 aaKnown RBP16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 MTPNP58546 118 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 IL1RL1Q01638 556 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 PPP1R8Q12972 351 aaKnown RBP16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 GLYATQ6IB77 296 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 UGT3A1Q6NUS8 523 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 BLOC1S3Q6QNY0 202 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 IL27RAQ6UWB1 636 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 GPSM1Q86YR5 675 aa16.34■□□□□ 0.21
CDC42EP4-201ENST00000335793 EPHX4Q8IUS5 362 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms