RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 WwoxQ91WL8 414 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 DcxrQ91X52 244 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cd209eQ91ZW7 208 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Efcab1Q9D3N2 212 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tlr6Q9EPW9 795 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fam166bA2AIP0 273 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ifit3bE9PV48 403 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr414E9Q5P8 317 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pate1E9Q658 125 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rnf169E9Q7F2 694 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm8011K7N6Y5 207 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Map2k3O09110 347 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 C2P21180 760 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pxmp2P42925 194 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 DckP43346 260 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Inpp1P49442 396 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tuba1cP68373 449 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Psme2P97372 239 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cpne9Q1RLL3 553 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lrfn1Q2WF71 766 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 P2rx3Q3UR32 397 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cldn11Q60771 207 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mon1aQ6PDG8 556 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slc39a4Q78IQ7 660 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr366Q7TRY4 309 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 UnkQ8BL48 810 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slc35a5Q921R7 437 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tuba8Q9JJZ2 449 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 4933424G06RikA0A140LIP3 267 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Itih4A6X935 942 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 TriqkB2B9E1 86 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cilp2D3Z7H8 1162 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Spdye4cI6XKQ3 339 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Anxa6P14824 673 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rab8aP55258 207 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Sppl2bQ3TD49 578 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 MslnQ61468 625 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rxfp4Q7TQP4 414 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Trnau1apQ80VC6 287 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pramel7Q810Y8 479 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cpped1Q8BFS6 312 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pex26Q8BGI5 305 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ptbp2Q91Z31 531 aaKnown RBP9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Npffr2Q924H0 417 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 AdprmQ99KS6 340 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Dph2Q9CR25 489 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pou5f2Q9DAC9 329 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 P33monoxQ9DBN4 303 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Thap11Q9JJD0 305 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slc6a14Q9JMA9 638 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 B9d1Q9R1S0 204 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 ArntlQ9WTL8 632 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Padi4Q9Z183 666 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 PikfyveQ9Z1T6 2097 aa9.7□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Acnat1A2AKK5 416 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 5830411N06RikB3F5L4 1112 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Phf11cB4XVP9 339 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fam124aD3Z5V4 536 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Speer4cG3UXD1 256 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Vmn2r54K7N649 806 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm10354K7N6A0 256 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 GzmkO35205 263 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lmf1Q3U3R4 574 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfml2bQ3V1G4 746 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Nr2c1Q505F1 590 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Brsk1Q5RJI5 778 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 NkaplQ5SZT7 395 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mapre1Q61166 268 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 BegainQ68EF6 600 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfp719Q8BIV1 735 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mrps35Q8BJZ4 320 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ifi44Q8BV66 422 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 NcaphQ8C156 731 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Q8CDN1 933 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr183Q8VFB9 309 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Oas1cQ924S2 362 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gstt3Q99L20 241 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mrpl1Q99N96 336 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Trpd52l3Q9CQ14 231 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Sugt1Q9CX34 336 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Q9D1K7 174 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Efhd2Q9D8Y0 240 aaKnown RBP9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cyp4a29A0A087WPC3 509 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr1153A2AVC0 318 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Obox5G3X9P6 291 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm3642K7N6V4 267 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 P01664 111 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cdh1P09803 884 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 F3P20352 294 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Drd4P51436 387 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 PamP97467 979 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slc6a4Q60857 630 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 DbhQ64237 622 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Nr6a1Q64249 495 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Klhl5Q6PFE1 708 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mgat5bQ765H6 792 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Dnajc15Q78YY6 149 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr1252Q7TQZ2 314 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fam72aQ8BFZ8 149 aa9.69□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Hs3st5Q8BSL4 346 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms