RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 MlxO08609 298 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ifi203O35368 408 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hmgcs2P54869 508 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rasa4Q6PFQ7 802 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fbxw21Q8BI38 468 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cacnb2Q8CC27 655 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam161aQ8QZV6 448 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gpn2Q8VEJ1 310 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mgrn1Q9D074 532 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Vmn2r103E9PWW0 856 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Hoxb6P09023 224 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 CkbQ04447 381 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 CcncQ62447 283 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Il17reQ8BH06 637 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nipal4Q8BZF2 406 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam221bQ8C627 487 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr1346Q8VGH6 313 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Akr1c21Q91WR5 323 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pcdhgb5Q91XX5 926 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 2310003L06RikQ9CV82 495 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 5530400C23RikQ9D3I0 173 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 IgtpQ9DCE9 423 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ca5bQ9QZA0 317 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Med20Q9R0X0 212 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ptgdr2Q9Z2J6 382 aa10.07□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm7929A0A286YDV3 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm21977F6U3N7 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8247F6VRJ8 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp946F6VWU8 523 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8005F6YKY3 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm3015F6ZAP6 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8212F6ZMY5 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm7954F7BAX1 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8138F7BY56 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8232F7CFJ3 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm17079F7D8Y4 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8094K7N6U8 211 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8165L7N218 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm8122L7N2C7 213 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm17078M0QW51 211 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Impdh1P50096 514 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sox10Q04888 466 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Kiaa0319Q5SZV5 1081 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sema5bQ60519 1093 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Stx16Q8BVI5 326 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zhx3Q8C0Q2 951 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Acsm1Q91VA0 573 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rsc1a1Q9ER99 582 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 TtkP35761 856 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pip5k1bP70181 539 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zdhhc11Q14AK4 347 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Naf1Q3UMQ8 489 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cpsf6Q6NVF9 551 aaKnown RBP10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cyth4Q80YW0 393 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Clcc1Q99LI2 539 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Smok4aA0JLX3 433 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 PotegA5H0M4 473 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Rab2bP59279 216 aaKnown RBP10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nol9Q3TZX8 714 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 ADGRF3Q58Y75 991 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Znf512Q69Z99 562 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam92aQ8BP22 355 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Asb17Q8VHP9 295 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 MvdQ99JF5 401 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Klhl22Q99JN2 634 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pole4Q9CQ36 118 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ern1Q9EQY0 977 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Abcb10Q9JI39 715 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 NbnQ9R207 751 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mapk9Q9WTU6 423 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Serpina3cP29621 417 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Lrig1P70193 1091 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 ChpfQ6IQX7 774 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Pofut2Q8VHI3 429 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Trem2Q99NH8 227 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Fam90a1bQ9D4F3 419 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zfp358E9Q8M1 571 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Siah1aP61092 282 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mgat3Q10470 538 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nr2f1Q60632 422 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Sp140Q6NSQ5 534 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Znf473Q8BI67 892 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Zc3h10Q8R205 435 aaKnown RBP10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gjd3Q91YD1 278 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bpifa3Q9D9J8 232 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Tle2Q9WVB2 767 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gm29106A0A087WSP8 697 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 AccsA2AIG8 502 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Gna13P27601 377 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Mc4rP56450 332 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bend4P86174 541 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 StyxQ60969 223 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Dnajc1Q61712 552 aaKnown RBP10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Serpina11Q8CIE0 424 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Cpne5Q8JZW4 593 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Nrif2Q921B4 824 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Bco2Q99NF1 532 aa10.06□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr839-ps1A0A1D5RMH6 312 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Ttll8A4Q9F1 832 aa10.05□□□□□ -0.8
Ubr1-201ENSMUST00000028728 Olfr456B2RT27 312 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms