RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 UstQ8BUB6 407 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Wdr59Q8C0M0 992 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Zfp62Q8C827 914 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Teddm1bQ8CC62 306 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Gatad2aQ8CHY6 629 aaKnown RBP11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Glra3Q91XP5 464 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Itfg1Q99KW9 610 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Arhgap8Q9CXP4 425 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Dlgap1Q9D415 992 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Tbc1d20Q9D9I4 402 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Doc2gQ9ESN1 387 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 SigirrQ9JLZ8 409 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 DnpepQ9Z2W0 473 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Brca1P48754 1812 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Lama3Q61789 3330 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ssxb9A2BI93 185 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Plekha5E9Q6H8 1269 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Anxa3O35639 323 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Pcbp1P60335 356 aaKnown RBP11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 FhP97807 507 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ptpn2Q06180 406 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Q5XFZ0 217 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Foxn1Q61575 648 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 CcncQ62447 283 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ppp1r26Q6A025 1163 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ces5aQ6AW46 575 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Cep78Q6IRU7 790 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Zc3h11aQ6NZF1 792 aaKnown RBP11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Tcaf3Q6QR59 914 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Lsm8Q6ZWM4 96 aaKnown RBP11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Spata2lQ8BNN1 426 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Celf3Q8CIN6 465 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Stau2Q8CJ67 570 aaKnown RBP11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Slc25a11Q9CR62 314 aaKnown RBP11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Tlr1Q9EPQ1 795 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Maged2Q9ER67 616 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ndrg3Q9QYF9 375 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Gria3Q9Z2W9 888 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Scn1aA2APX8 2009 aa11.42□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Cylc1A0A1B0GR13 642 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Olfr1164A2AVT5 326 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Zfp973A2BE20 318 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Itga10E9Q6R1 1167 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Fgf18O89101 207 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 UmpsP13439 481 aaKnown RBP11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 F9P16294 471 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Nfkb1P25799 971 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Tnfsf4P43488 198 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ccr5P51682 354 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Slc12a1P55014 1095 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Slc26a1P58735 704 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Psmb4P99026 264 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Nfe2Q07279 373 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Actr3bQ641P0 418 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Wscd1Q80XH4 572 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Snx32Q80ZJ7 404 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Teddm1aQ810U2 305 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Gpr171Q8BG55 319 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Dmtf1Q8CE22 761 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Cdc16Q8R349 620 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ppp1r8Q8R3G1 351 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Acsm1Q91VA0 573 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Retreg3Q9CQV4 466 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ccnyl1D3YUJ3 367 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Akap5D3YVF0 745 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 AlpiF8VPQ6 554 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Psmd3P14685 530 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Il6stQ00560 917 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Oas1fQ14AZ4 364 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Col28a1Q2UY11 1141 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Pdss2Q33DR3 401 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 CcnjQ3TZI6 379 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Ccdc61Q3UJV1 511 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Fgfr3Q61851 801 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 BC061212Q6P8K3 481 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Cndp1Q8BUG2 492 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Aph1bQ8C7N7 257 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Pde10aQ8CA95 790 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Zbtb20Q8K0L9 741 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Oit3Q8R4V5 546 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Vps11Q91W86 941 aaKnown RBP11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Pcyox1Q9CQF9 505 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 IqchQ9D2K4 1071 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 GOLGA7BQ9D428 167 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Satl1Q9D5N8 744 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Spock2Q9ER58 423 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Cyp11a1Q9QZ82 526 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Dnajc12Q9R022 198 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 CdylQ9WTK2 593 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Deaf1Q9Z1T5 566 aa11.41□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Myo18aQ9JMH9 2050 aaKnown RBP11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 0610012G03RikA0A0J9YTR2 95 aa11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Morn1A2RTS7 477 aa11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Cyp4f17G3UW78 524 aa11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Pgk1P09411 417 aaKnown RBP11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Etv1P41164 477 aa11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Stmn1P54227 149 aaKnown RBP11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Lrpap1P55302 360 aa11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 GaaP70699 953 aa11.4□□□□□ -0.58
Sdc1-201ENSMUST00000020911 Sephs2P97364 452 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms