RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Trim40Q3UWA4 246 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Zmat1Q3V0C1 714 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gpr141Q7TQP0 305 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 IfneQ80ZF2 192 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Klhl42Q8BFQ9 493 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Parp9Q8CAS9 866 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Cacnb2Q8CC27 655 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Map3k21Q8VDG6 1002 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 WwoxQ91WL8 414 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Unc50Q9CQ61 259 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Tubd1Q9R1K7 455 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gsk3bQ9WV60 420 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Veph1A1A535 833 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Tbc1d25A1A5B6 742 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Spdye4cI6XKQ3 339 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Bcl7cO08664 217 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Alox8O35936 677 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Aldh2P47738 519 aaKnown RBP16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Tuba4aP68368 448 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rasgrp3Q6NZH9 691 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Olfr698Q7TRN4 311 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Mrps35Q8BJZ4 320 aaKnown RBP16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Itpk1Q8BYN3 419 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Casp9Q8C3Q9 454 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Mtmr14Q8VEL2 648 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Cdkal1Q91WE6 578 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gins4Q99LZ3 223 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Atp6ap2Q9CYN9 350 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Fads3Q9JJE7 449 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Tsga8Q9JJL0 238 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Il22bQ9JJY8 179 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 Vps13aQ5H8C4 3166 aa16.07■□□□□ 0.16
Trim28-201ENSMUST00000005705 TriqkB2B9E1 86 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Mybpc1D3YU50 1127 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Pik3cdO35904 1043 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Hoxa2P31245 372 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Kctd21Q3URF8 260 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Olfml2bQ3V1G4 746 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Ltbp3Q61810 1268 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Slc13a5Q67BT3 572 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 SyncripQ7TMK9 623 aaKnown RBP16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Parp12Q8BZ20 711 aaKnown RBP16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Spdye4bQ8CDE8 236 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Sept8Q8CHH9 429 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Ipo13Q8K0C1 963 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Traf3ip2Q8N7N6 555 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Olfr570Q8VH12 312 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Cmc1Q9CPZ8 106 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Nacc2Q9DCM7 586 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Hs6st1Q9QYK5 411 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Ralgapa2A3KGS3 1872 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Kdelc2G5E897 503 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 1700122O11RikJ3QPW6 241 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Capn5O08688 640 aaKnown RBP16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Plk5Q4FZD7 595 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Foxj1Q61660 421 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Letm2Q7TNU7 480 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Olfr1085Q7TR64 313 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Nim1kQ8BHI9 436 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Defb19Q8K3I8 83 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Dapk2Q8VDF3 370 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Fbxo21Q8VDH1 627 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Mark1Q8VHJ5 795 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Q9D1K7 174 aaKnown RBP16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 NckipsdQ9ESJ4 714 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Smurf2A2A5Z6 748 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Vmn2r120E9PX34 856 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 1700011I03RikE9PYL8 271 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gm21738J3QP72 227 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Myf6P15375 242 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 DckP43346 260 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Rbp1Q00915 135 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Lsmem1Q3UQS2 128 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Pgs1Q8BHF7 553 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 DtnaQ9D2N4 746 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 AadatQ9WVM8 425 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 Padi4Q9Z183 666 aa16.06■□□□□ 0.16
Trim28-201ENSMUST00000005705 L3mbtl1A2A5N8 826 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gm8267E9Q207 261 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Pate1E9Q658 125 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Gm20503G3UZK1 150 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 PigfO09101 219 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Azin1O35484 448 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 C2P21180 760 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Tap1P21958 724 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Sstr4P49660 385 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Pcbp1P60335 356 aaKnown RBP16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Kcnab3P97382 249 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Armc7Q3UJZ3 198 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Glp2rQ5IXF8 512 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Zfp78Q5U406 512 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Tnfaip2Q61333 691 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Itih2Q61703 946 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Eif2s1Q6ZWX6 315 aaKnown RBP16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Slc45a1Q8BIV7 751 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Zbtb33Q8BN78 671 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 PolbQ8K409 335 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 HnrnplQ8R081 586 aaKnown RBP16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Cant1Q8VCF1 403 aa16.05■□□□□ 0.16
Trim28-201ENSMUST00000005705 Fig4Q91WF7 907 aa16.05■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms