RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 KCTD19Q17RG1 926 aaPredicted RBP19.43■□□□□ 0.7
LSM4-203ENST00000593829 PRRT3Q5FWE3 981 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 HIBCHQ6NVY1 386 aaPredicted RBP19.43■□□□□ 0.7
LSM4-203ENST00000593829 OR4K2Q8NGD2 314 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 DTX3LQ8TDB6 740 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 MIEF2Q96C03 454 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 PDXPQ96GD0 296 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 IL26Q9NPH9 171 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 MOSPD1Q9UJG1 213 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 CNOT6Q9ULM6 557 aaKnown RBP19.43■□□□□ 0.7
LSM4-203ENST00000593829 SUFUQ9UMX1 484 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 KCTD3Q9Y597 815 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 CSNK1G3Q9Y6M4 447 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 AQP9O43315 295 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 SNX3O60493 162 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 CBFA2T3O75081 653 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 CEACAM1P13688 526 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 CTSEP14091 401 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 GRIA1P42261 906 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 NOVA1P51513 510 aaKnown RBP19.43■□□□□ 0.7
LSM4-203ENST00000593829 PTPRCAPQ14761 206 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 POU6F1Q14863 301 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 GALNTL6Q49A17 601 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 TRIM74Q86UV6 250 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 EID2Q8N6I1 236 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 LMX1AQ8TE12 382 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 SLCO2A1Q92959 643 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 C19orf43Q9BQ61 176 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 CYP4F12Q9HCS2 524 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 MRPL40Q9NQ50 206 aaKnown RBP19.43■□□□□ 0.7
LSM4-203ENST00000593829 CASS4Q9NQ75 786 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 SLC17A4Q9Y2C5 497 aa19.43■□□□□ 0.7
LSM4-203ENST00000593829 PRSS38A1L453 326 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 RASGRF2O14827 1237 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 SCAMP1O15126 338 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 LDB2O43679 373 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 KCNK5O95279 499 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 CDK16Q00536 496 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 DOK6Q6PKX4 331 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 LRRC61Q9BV99 259 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 TMEM98Q9Y2Y6 226 aa19.42■□□□□ 0.7
LSM4-203ENST00000593829 GLYATL1P3A0A0U1RQE8 302 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 TPSB2P20231 275 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 POLD2P49005 469 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 SEPT6Q14141 434 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 ELOCQ15369 112 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 TPSAB1Q15661 275 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 FAM151BQ6UXP7 276 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 FSTL5Q8N475 847 aaPredicted RBP19.41■□□□□ 0.7
LSM4-203ENST00000593829 BAHD1Q8TBE0 780 aaPredicted RBP19.41■□□□□ 0.7
LSM4-203ENST00000593829 CDC6Q99741 560 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 ELAC2Q9BQ52 826 aaKnown RBP19.41■□□□□ 0.7
LSM4-203ENST00000593829 SCN8AQ9UQD0 1980 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 SPTBN4Q9H254 2564 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 TLDC2A0PJX2 215 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 AP3B1O00203 1094 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 FFAR2O15552 330 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 SLC25A14O95258 325 aaPredicted RBP19.41■□□□□ 0.7
LSM4-203ENST00000593829 ASMTLO95671 621 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 ATP5DP30049 168 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 HADHAP40939 763 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 ZNF140P52738 457 aaPredicted RBP19.41■□□□□ 0.7
LSM4-203ENST00000593829 C1orf61Q13536 156 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 CHRNA6Q15825 494 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 ATP13A5Q4VNC0 1218 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 CERCAMQ5T4B2 595 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 PSAPL1Q6NUJ1 521 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 OR13C4Q8NGS5 318 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 GLYATL1Q969I3 302 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 SERPINB12Q96P63 405 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 VPS35Q96QK1 796 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 CARS2Q9HA77 564 aaKnown RBP19.41■□□□□ 0.7
LSM4-203ENST00000593829 NLGN3Q9NZ94 848 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 APPL1Q9UKG1 709 aa19.41■□□□□ 0.7
LSM4-203ENST00000593829 FUCA1P04066 466 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 ALPPL2P10696 532 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 MAGEA6P43360 314 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 LAMB3Q13751 1172 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 ITGA9Q13797 1035 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 TRIP6Q15654 476 aaKnown RBP19.4■□□□□ 0.7
LSM4-203ENST00000593829 DGLUCYQ7Z3D6 616 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 PHYKPLQ8IUZ5 450 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 OR4C6Q8NH72 309 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 SCARF2Q96GP6 870 aaPredicted RBP19.4■□□□□ 0.7
LSM4-203ENST00000593829 DUSP23Q9BVJ7 150 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 CLPBQ9H078 707 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 BATF3Q9NR55 127 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 FKBPLQ9UIM3 349 aa19.4■□□□□ 0.7
LSM4-203ENST00000593829 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.4■□□□□ 0.7
LSM4-203ENST00000593829 OAS3Q9Y6K5 1087 aaKnown RBP19.4■□□□□ 0.7
LSM4-203ENST00000593829 LMO7DNF2Z398 122 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 GIPC1O14908 333 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 VIMP08670 466 aaKnown RBP19.39■□□□□ 0.7
LSM4-203ENST00000593829 KCNA4P22459 653 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 GNPDA1P46926 289 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 SARNPP82979 210 aaKnown RBP19.39■□□□□ 0.7
LSM4-203ENST00000593829 TMPRSS15P98073 1019 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 KCNJ11Q14654 390 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 SDR16C5Q8N3Y7 309 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 TRIM39Q9HCM9 518 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms