RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 C8orf48Q96LL4 319 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 TSPAN18Q96SJ8 248 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 HCFC1R1Q9NWW0 138 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 SH3BP4Q9P0V3 963 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 RANBP2P49792 3224 aaKnown RBP16.06■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF37AP17032 561 aaPredicted RBP16.06■□□□□ 0.16
RAB40B-206ENST00000571995 ST8SIA6P61647 398 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 MSLNQ13421 630 aaPredicted RBP16.06■□□□□ 0.16
RAB40B-206ENST00000571995 KRT33BQ14525 404 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 TSPAN33Q86UF1 283 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 SELENOMQ8WWX9 145 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 DPY30Q9C005 99 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 CACNA2D2Q9NY47 1150 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 VPS51Q9UID3 782 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 RLFQ13129 1914 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 FFAR2O15552 330 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 FAM58BPP0C7Q3 252 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 IMPDH1P20839 514 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 CTNNB1P35222 781 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 CDH4P55283 916 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 TMEM214Q6NUQ4 689 aaKnown RBP16.06■□□□□ 0.16
RAB40B-206ENST00000571995 SLC2A7Q6PXP3 512 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 TRMT11Q7Z4G4 463 aaKnown RBP16.06■□□□□ 0.16
RAB40B-206ENST00000571995 SLC22A15Q8IZD6 547 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 ARRDC2Q8TBH0 407 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 KLHL32Q96NJ5 620 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 EBPLQ9BY08 206 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 MAGEH1Q9H213 219 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 MFSD1Q9H3U5 465 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 LMCD1Q9NZU5 365 aa16.06■□□□□ 0.16
RAB40B-206ENST00000571995 TNS1Q9HBL0 1735 aaKnown RBP16.06■□□□□ 0.16
RAB40B-206ENST00000571995 GNG14A0A1W2PPG7 69 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 PTGES3LE9PB15 166 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 LZTS3O60299 673 aaPredicted RBP16.05■□□□□ 0.16
RAB40B-206ENST00000571995 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 SERPINA4P29622 427 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 DPP6P42658 865 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 HERVK_113P63132 956 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF678Q5SXM1 525 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF549Q6P9A3 640 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 TMC5Q6UXY8 1006 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 KIAA0408Q6ZU52 694 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 TRIM74Q86UV6 250 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 TRAPPC5Q8IUR0 188 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 FAM110BQ8TC76 370 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ELMO1Q92556 727 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ERVK-6Q9BXR3 956 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 TDRKHQ9Y2W6 561 aaKnown RBP16.05■□□□□ 0.16
RAB40B-206ENST00000571995 UBFD1O14562 309 aaKnown RBP16.05■□□□□ 0.16
RAB40B-206ENST00000571995 IGSF6O95976 241 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 CYP11A1P05108 521 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 STC1P52823 247 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ESRRGP62508 458 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 CD300LGQ6UXG3 332 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF461Q8TAF7 563 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ZFYVE19Q96K21 471 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ARMC7Q9H6L4 198 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 SPG21Q9NZD8 308 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 RAD51BO15315 384 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 MAN1A2O60476 641 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 HTR6P50406 440 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 TRIM25Q14258 630 aaKnown RBP16.05■□□□□ 0.16
RAB40B-206ENST00000571995 LAPTM4AQ15012 233 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 CHRNA6Q15825 494 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 AARS2Q5JTZ9 985 aaKnown RBP16.05■□□□□ 0.16
RAB40B-206ENST00000571995 CYS1Q717R9 158 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 MDGA1Q8NFP4 955 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 BCL7CQ8WUZ0 217 aaPredicted RBP16.05■□□□□ 0.16
RAB40B-206ENST00000571995 AURKBQ96GD4 344 aaPredicted RBP16.05■□□□□ 0.16
RAB40B-206ENST00000571995 C1QTNF1Q9BXJ1 281 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 ASAH2Q9NR71 780 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 SLAMF8Q9P0V8 285 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 WNT6Q9Y6F9 365 aa16.05■□□□□ 0.16
RAB40B-206ENST00000571995 DHRS12A0PJE2 317 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 IHHQ14623 411 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 AAK1Q2M2I8 961 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 CRTC3Q6UUV7 619 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 ZNF621Q6ZSS3 439 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 LRRC49Q8IUZ0 686 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 MAGED4Q96JG8 741 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 VCX3AQ9NNX9 186 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 PCDH12Q9NPG4 1184 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 PCDHGB4Q9UN71 923 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 PRKAB1Q9Y478 270 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 PCDHGB5Q9Y5G0 923 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 RPLP2P05387 115 aaKnown RBP16.04■□□□□ 0.16
RAB40B-206ENST00000571995 LCP2Q13094 533 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 LAMB3Q13751 1172 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 TLR1Q15399 786 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 RFLNAQ6ZTI6 216 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 SNRNP27Q8WVK2 155 aaKnown RBP16.04■□□□□ 0.16
RAB40B-206ENST00000571995 AARSD1Q9BTE6 412 aaKnown RBP16.04■□□□□ 0.16
RAB40B-206ENST00000571995 TRIM15Q9C019 465 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 TREX1Q9NSU2 369 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 ULK1O75385 1050 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 CD1DP15813 335 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 MGAT3Q09327 533 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 LAPTM5Q13571 262 aa16.04■□□□□ 0.16
RAB40B-206ENST00000571995 PTGR1Q14914 329 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms