RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 DET1Q7L5Y6 550 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 RALGPS2Q86X27 583 aaPredicted RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 PNPT1Q8TCS8 783 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 ERLEC1Q96DZ1 483 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 C9orf16Q9BUW7 83 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 ADI1Q9BV57 179 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 YTHDF1Q9BYJ9 559 aaKnown RBP10.38□□□□□ -0.75
RNF40-204ENST00000563683 TLR6Q9Y2C9 796 aa10.38□□□□□ -0.75
RNF40-204ENST00000563683 NUP205Q92621 2012 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 C16orf96A6NNT2 1141 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 PTGES3LE9PB15 166 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 H3BMM5 538 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 AURKAO14965 403 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 KDM1AO60341 852 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 NPHS1O60500 1241 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 SULT1C4O75897 302 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 ZNF865P0CJ78 1059 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 C7P10643 843 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 CKMT2P17540 419 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 MZF1P28698 734 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 RPL38P63173 70 aaKnown RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 INTS11Q5TA45 600 aaKnown RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 FUT10Q6P4F1 479 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 TTC23LQ6PF05 361 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 CYP4V2Q6ZWL3 525 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 ITFG1Q8TB96 612 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 STYXQ8WUJ0 223 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 VPS33AQ96AX1 596 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 ANAPC2Q9UJX6 822 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 PCDHGA7Q9Y5G6 932 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 E7ENX8 843 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 GRID2O43424 1007 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 FOXD2O60548 495 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 MLYCDO95822 493 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 CHRNA1P02708 482 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 TYMPP19971 482 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 RXRGP48443 463 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 BMXP51813 675 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 MERTKQ12866 999 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 BNIP3Q12983 259 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 ITGADQ13349 1161 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 RAB39AQ14964 217 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 PPP1R3AQ16821 1122 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 FAM98BQ52LJ0 330 aaKnown RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 PAQR9Q6ZVX9 377 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 ERMP1Q7Z2K6 904 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 CPNE9Q8IYJ1 553 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 BRSK1Q8TDC3 778 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 HEPHQ9BQS7 1158 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 SMOC2Q9H3U7 446 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 DUS2Q9NX74 493 aaKnown RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 SPASTQ9UBP0 616 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 FKBPLQ9UIM3 349 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 SLC45A1Q9Y2W3 748 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 MBLAC1A4D2B0 266 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 ACSL4O60488 711 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 DEAF1O75398 565 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 KRT6AP02538 564 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 KRT6BP04259 564 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 INHBBP09529 407 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 KRT6CP48668 564 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 POLD2P49005 469 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 ATP6V0D1P61421 351 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 IL10RBQ08334 325 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 KRT33BQ14525 404 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 TRIP4Q15650 581 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 BCL2A1Q16548 175 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 FOPNLQ96NB1 174 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 YME1L1Q96TA2 773 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 PTPN18Q99952 460 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 C2orf49Q9BVC5 232 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 MRPL9Q9BYD2 267 aaKnown RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 FAM126AQ9BYI3 521 aaPredicted RBP10.37□□□□□ -0.75
RNF40-204ENST00000563683 ARMC1Q9NVT9 282 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 ATP11BQ9Y2G3 1177 aa10.37□□□□□ -0.75
RNF40-204ENST00000563683 PLOD2O00469 737 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 SLC22A3O75751 556 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 GABBR2O75899 941 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 GSTT2P0CG29 244 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 GSTT2BP0CG30 244 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 FCGR1AP12314 374 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 TMBIM6P55061 237 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 PMS2P3Q13401 168 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 POM121L1PQ3SYA9 428 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 MS4A13Q5J8X5 152 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 FGD3Q5JSP0 725 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 ANKRD26P1Q6NSI1 321 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 IFNL1Q8IU54 200 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 OR2T34Q8NGX1 318 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 OR2T3Q8NH03 318 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 CLHC1Q8NHS4 586 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 MS4A4AQ96JQ5 239 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 ARMC7Q9H6L4 198 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 LEF1Q9UJU2 399 aaPredicted RBP10.36□□□□□ -0.75
RNF40-204ENST00000563683 TLL2Q9Y6L7 1015 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 SCN4AP35499 1836 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 EP400Q96L91 3159 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 MAFKO60675 156 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 VPS4BO75351 444 aa10.36□□□□□ -0.75
RNF40-204ENST00000563683 ULK1O75385 1050 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms