RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 HDAC11Q96DB2 347 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 SYT11Q9BT88 431 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 MFRPQ9BY79 579 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 TRIM55Q9BYV6 548 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 TWSG1Q9GZX9 223 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 FAM83DQ9H4H8 585 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 RBM22Q9NW64 420 aaKnown RBP eCLIP8.37□□□□□ -1.07
TROAP-208ENST00000548817 AMACRQ9UHK6 382 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 CROTQ9UKG9 612 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 RPL26L1Q9UNX3 145 aaKnown RBP8.37□□□□□ -1.07
TROAP-208ENST00000548817 KCNK6Q9Y257 313 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 CHKBQ9Y259 395 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 ST14Q9Y5Y6 855 aa8.37□□□□□ -1.07
TROAP-208ENST00000548817 BZW2Q9Y6E2 419 aaKnown RBP8.37□□□□□ -1.07
TROAP-208ENST00000548817 C1orf232A0A0U1RR37 186 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 PIPSLA2A3N6 862 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 RGSL1A5PLK6 1076 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 C21orf140B9A014 251 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 PRSS44E7EML9 344 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 MYO1FO00160 1098 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 DDX3XO00571 662 aaKnown RBP eCLIP8.36□□□□□ -1.07
TROAP-208ENST00000548817 MATN3O15232 486 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 GRID2O43424 1007 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 FZD6O60353 706 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 CEACAM4O75871 244 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 MTA2O94776 668 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 CLDN7O95471 211 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 VIPP01282 170 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 ATP1A1P05023 1023 aaKnown RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 SKILP12757 684 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 ACP5P13686 325 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 F3P13726 295 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 AMD1P17707 334 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 MX2P20592 715 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 PRKCIP41743 596 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 ITGA1P56199 1179 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 PTPRRQ15256 657 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 TDRD12Q587J7 1177 aaKnown RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 ANKRD20A8PQ5CZ79 823 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 CYB5D1Q6P9G0 228 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 C6orf15Q6UXA7 325 aaPredicted RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 CYP4V2Q6ZWL3 525 aaPredicted RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 TEX26Q8N6G2 289 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 CCNYQ8ND76 341 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 COX14Q96I36 57 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 ZNF830Q96NB3 372 aaPredicted RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 AGAP2Q99490 1192 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 MLPHQ9BV36 600 aaPredicted RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 ADGRE3Q9BY15 652 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 OSGEPL1Q9H4B0 414 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 PCDH18Q9HCL0 1135 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 RTN4Q9NQC3 1192 aaKnown RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 RAD18Q9NS91 495 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 TMEM63CQ9P1W3 806 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 CPNE7Q9UBL6 633 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 TBC1D29Q9UFV1 150 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 ANAPC7Q9UJX3 599 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 ITGB1BP2Q9UKP3 347 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 PRKAB1Q9Y478 270 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 KLF2Q9Y5W3 355 aaPredicted RBP8.36□□□□□ -1.07
TROAP-208ENST00000548817 PKDREJQ9NTG1 2253 aa8.36□□□□□ -1.07
TROAP-208ENST00000548817 A0A0U1RQS6 177 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 GOLGA6L3A6NEY3 463 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 DNAJC6O75061 913 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 KATNA1O75449 491 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 RASSF9O75901 435 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 SOD1P00441 154 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 MT-ND3P03897 115 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 CAPN3P20807 821 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 CCNCP24863 283 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 CASP14P31944 242 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 GJC1P36383 396 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 GARSP41250 739 aaKnown RBP8.35□□□□□ -1.07
TROAP-208ENST00000548817 SPINT3P49223 89 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 DSC2Q02487 901 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 ART3Q13508 389 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 DNASE1L3Q13609 305 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 UGT8Q16880 541 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 ZNF569Q5MCW4 686 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 CCDC183Q5T5S1 534 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 CCDC70Q6NSX1 233 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 APTXQ7Z2E3 356 aaKnown RBP8.35□□□□□ -1.07
TROAP-208ENST00000548817 RASGRP3Q8IV61 690 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 SNRNP40Q96DI7 357 aaKnown RBP8.35□□□□□ -1.07
TROAP-208ENST00000548817 STAMBPL1Q96FJ0 436 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 BARD1Q99728 777 aaKnown RBP8.35□□□□□ -1.07
TROAP-208ENST00000548817 NUP85Q9BW27 656 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 SPATA16Q9BXB7 569 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 TDRD1Q9BXT4 1180 aaKnown RBP8.35□□□□□ -1.07
TROAP-208ENST00000548817 ULBP3Q9BZM4 244 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 ISCUQ9H1K1 167 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 OR2AG1Q9H205 316 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 CARD9Q9H257 536 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 APMAPQ9HDC9 416 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 ACSS2Q9NR19 701 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 KLC4Q9NSK0 619 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 ASF1BQ9NVP2 202 aa8.35□□□□□ -1.07
TROAP-208ENST00000548817 LILRA5A6NI73 299 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms