RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 GHITMQ9H3K2 345 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 CATSPERBQ9H7T0 1116 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 CCNB1IP1Q9NPC3 277 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 FAM49BQ9NUQ9 324 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 C14orf119Q9NWQ9 140 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 MBD2Q9UBB5 411 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 MAGED2Q9UNF1 606 aaPredicted RBP8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 ACTL7AQ9Y615 435 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 GLI3P10071 1580 aa8.46□□□□□ -1.05
SRGAP1-202ENST00000537556 SDHDO14521 159 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 KPNA5O15131 536 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 KCNN4O15554 427 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 TNFRSF21O75509 655 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 LRIG2O94898 1065 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 PGLSO95336 258 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ATF3P18847 181 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 GNA15P30679 374 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SPRP35270 261 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 NAGLUP54802 743 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 RAB25P57735 213 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ISL1P61371 349 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 TFDP2Q14188 446 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 PPP1R26Q5T8A7 1209 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 GLYATQ6IB77 296 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 CASC4Q6P4E1 433 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 TEX261Q6UWH6 196 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 LIMS2Q7Z4I7 341 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SYVN1Q86TM6 617 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 VWA5B2Q8N398 1253 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 MINDY1Q8N5J2 469 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ATAD1Q8NBU5 361 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ELMO1Q92556 727 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC38A4Q969I6 547 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 AP2M1Q96CW1 435 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 TUBGCP3Q96CW5 907 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 DCLRE1CQ96SD1 692 aaKnown RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC30A2Q9BRI3 323 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ZBTB20Q9HC78 741 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ELF5Q9UKW6 265 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 RAB23Q9ULC3 237 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 NDUFAF1Q9Y375 327 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 U3KQ87 197 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 KIAA1551Q9HCM1 1747 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 A0A1B0GVM2 712 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 CIB4A0PJX0 185 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 LINC01387J3KSC0 135 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SOCS7O14512 581 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 STX16O14662 325 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ANGPTL1O95841 491 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 LTFP02788 710 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 MAPTP10636 758 aaKnown RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 RYKP34925 604 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 RFX2P48378 723 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 RAB14P61106 215 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 EN1Q05925 392 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 POU5F1BQ06416 359 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SP140Q13342 867 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 IRF5Q13568 498 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SEMA3AQ14563 771 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SNRNP35Q16560 246 aaKnown RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SMTNL2Q2TAL5 461 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 BRDTQ58F21 947 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 WDR44Q5JSH3 913 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 METTL11BQ5VVY1 283 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 STEAP4Q687X5 459 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 TXNDC11Q6PKC3 985 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ZYG11AQ6WRX3 759 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 CCDC190Q86UF4 302 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 FAM124AQ86V42 546 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 KDM1BQ8NB78 822 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 WDR48Q8TAF3 677 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 MFSD3Q96ES6 412 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 TRNT1Q96Q11 434 aaKnown RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 CPNE1Q99829 537 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 NAT9Q9BTE0 207 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 TTLL2Q9BWV7 592 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 ACE2Q9BYF1 805 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SDCBP2Q9H190 292 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 SAV1Q9H4B6 383 aaPredicted RBP8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 COL20A1Q9P218 1284 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 C3orf18Q9UK00 162 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 COPS3Q9UNS2 423 aa8.46□□□□□ -1.06
SRGAP1-202ENST00000537556 A0A096LPK6 155 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 TSC22D2O75157 780 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 SUPT7LO94864 414 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 FAM86B2P0C5J1 330 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 HDCP19113 662 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 TPSB2P20231 275 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 MAGEA12P43365 314 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 GYG1P46976 350 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 PER3P56645 1201 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 TPSAB1Q15661 275 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 Q3ZCU0 254 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 TRIM60Q495X7 471 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 VARS2Q5ST30 1063 aaKnown RBP8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 SETD9Q8NE22 299 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF680Q8NEM1 530 aa8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 SYTL5Q8TDW5 730 aaPredicted RBP8.45□□□□□ -1.06
SRGAP1-202ENST00000537556 ST8SIA2Q92186 375 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms