RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 RCOR3Q9P2K3 495 aaPredicted RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 TLK1Q9UKI8 766 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 PYCARDQ9ULZ3 195 aa17.07■□□□□ 0.32
PKP3-208ENST00000531857 RPL26L1Q9UNX3 145 aaKnown RBP17.07■□□□□ 0.32
PKP3-208ENST00000531857 NBPF19A0A087WUL8 3843 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 ANKRD66B4E2M5 251 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 NDUFA10O95299 355 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 PDGFAP04085 211 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 MMP2P08253 660 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 CCNCP24863 283 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 UQCRFS1P47985 274 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 CLCNKAP51800 687 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 DPYSL3Q14195 570 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 IFI16Q16666 785 aaKnown RBP17.06■□□□□ 0.32
PKP3-208ENST00000531857 FIGNQ5HY92 759 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 CRTC3Q6UUV7 619 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 ADGRG6Q86SQ4 1221 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 ATCAYQ86WG3 371 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 RASGRP3Q8IV61 690 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 STAMBPL1Q96FJ0 436 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 TSGA13Q96PP4 275 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 ZNF768Q9H5H4 540 aaKnown RBP17.06■□□□□ 0.32
PKP3-208ENST00000531857 IP6K2Q9UHH9 426 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 ANAPC7Q9UJX3 599 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 POLHQ9Y253 713 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 MED13Q9UHV7 2174 aa17.06■□□□□ 0.32
PKP3-208ENST00000531857 SHANK1Q9Y566 2161 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 CDC14CA4D256 554 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 SLC25A14O95258 325 aaPredicted RBP17.05■□□□□ 0.32
PKP3-208ENST00000531857 VIPP01282 170 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 AMD1P17707 334 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 CA4P22748 312 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 SSR1P43307 286 aaKnown RBP17.05■□□□□ 0.32
PKP3-208ENST00000531857 IL11RAQ14626 422 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 SEPT7Q16181 437 aaKnown RBP17.05■□□□□ 0.32
PKP3-208ENST00000531857 ALS2CLQ60I27 953 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 CPNE8Q86YQ8 564 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 AVL9Q8NBF6 648 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 GPR26Q8NDV2 337 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 CCHCR1Q8TD31 782 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 RSC1A1Q92681 617 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 FATE1Q969F0 183 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 BAG1Q99933 345 aaPredicted RBP17.05■□□□□ 0.32
PKP3-208ENST00000531857 MLPHQ9BV36 600 aaPredicted RBP17.05■□□□□ 0.32
PKP3-208ENST00000531857 SPATA16Q9BXB7 569 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 LRRC4CQ9HCJ2 640 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 TRIM39Q9HCM9 518 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 AMACRQ9UHK6 382 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 DNAJC16Q9Y2G8 782 aa17.05■□□□□ 0.32
PKP3-208ENST00000531857 RGSL1A5PLK6 1076 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 CHUKO15111 745 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 TOX3O15405 576 aaPredicted RBP17.04■□□□□ 0.32
PKP3-208ENST00000531857 SPAG6O75602 509 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 CREG1O75629 220 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 RFPL1O75677 317 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 RASSF9O75901 435 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 DNAJB5O75953 348 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 TIAF1O95411 115 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 BRAFP15056 766 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 CD86P42081 329 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 PMS2P54278 862 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 GBE1Q04446 702 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 SLC10A2Q12908 348 aaPredicted RBP17.04■□□□□ 0.32
PKP3-208ENST00000531857 GALNT3Q14435 633 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 TDRD12Q587J7 1177 aaKnown RBP17.04■□□□□ 0.32
PKP3-208ENST00000531857 FAM92BQ6ZTR7 304 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 TMTC1Q8IUR5 882 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 TRIM48Q8IWZ4 208 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 NUP85Q9BW27 656 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 TWSG1Q9GZX9 223 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 BRD8Q9H0E9 1235 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 LNPEPQ9UIQ6 1025 aa17.04■□□□□ 0.32
PKP3-208ENST00000531857 PIPSLA2A3N6 862 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 MTX2O75431 263 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 MTA2O94776 668 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 PIRTP0C851 137 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 FGF5P12034 268 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 ZNF7P17097 686 aaPredicted RBP17.03■□□□□ 0.32
PKP3-208ENST00000531857 FECHP22830 423 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 RPL10P27635 214 aaKnown RBP17.03■□□□□ 0.32
PKP3-208ENST00000531857 GJC1P36383 396 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 DNASE1L3Q13609 305 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 INSCQ1MX18 579 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 ZNF569Q5MCW4 686 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 CACHD1Q5VU97 1274 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 HGSNATQ68CP4 663 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 ZNF547Q8IVP9 402 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 PQLC3Q8N755 202 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 CT55Q8WUE5 264 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 KLHL6Q8WZ60 621 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 RUFY1Q96T51 708 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 TRIM55Q9BYV6 548 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 KCND3Q9UK17 655 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 PADI1Q9ULC6 663 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 SHOC2Q9UQ13 582 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 PCDHGA6Q9Y5G7 932 aa17.03■□□□□ 0.32
PKP3-208ENST00000531857 A0A1W2PQJ5 194 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 OR52A4PA6NMU1 304 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms