RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 SPRED1Q7Z699 444 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 SLC9B2Q86UD5 537 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 CARFQ8N187 725 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 ARL14Q8N4G2 192 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 BEND7Q8N7W2 519 aaPredicted RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 RASGEF1AQ8N9B8 481 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 MAPK15Q8TD08 544 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 MS4A14Q96JA4 679 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 TTC1Q99614 292 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 SCNM1Q9BWG6 230 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 OR2AG1Q9H205 316 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 ASB8Q9H765 288 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 TRMT1Q9NXH9 659 aaKnown RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 BFARQ9NZS9 450 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 FKBPLQ9UIM3 349 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 PCDHGA8Q9Y5G5 932 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 MGAT4DA6NG13 374 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 INPP4BO15327 924 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 CDK14O94921 469 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 IFNB1P01574 187 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 ETS1P14921 441 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 RPS3P23396 243 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLK4-209ENST00000521621 ZFP36L1Q07352 338 aaKnown RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 FOXC1Q12948 553 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 C1orf61Q13536 156 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 SPARCL1Q14515 664 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 KHDC1Q4VXA5 237 aaKnown RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 PERM1Q5SV97 790 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 ALS2CLQ60I27 953 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 METRNLQ641Q3 311 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 WDR74Q6RFH5 385 aaPredicted RBP9.32□□□□□ -0.92
CLK4-209ENST00000521621 XKR5Q6UX68 686 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 FAM151BQ6UXP7 276 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 PPIL6Q8IXY8 311 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 LSMEM2Q8N112 164 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 FAM46DQ8NEK8 389 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 CPT1BQ92523 772 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 TCF12Q99081 682 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 CCDC3Q9BQI4 270 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 LRRN3Q9H3W5 708 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 VPS37BQ9H9H4 285 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 BPIFA1Q9NP55 256 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 CLCA2Q9UQC9 943 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 GPSM3Q9Y4H4 160 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 SLC30A1Q9Y6M5 507 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 RNF215Q9Y6U7 377 aa9.32□□□□□ -0.92
CLK4-209ENST00000521621 FAM237BA0A1B0GVD1 139 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 KIF2AO00139 706 aaPredicted RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 TOX3O15405 576 aaPredicted RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 APRTP07741 180 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 ATP1B2P14415 290 aaPredicted RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 MSH3P20585 1137 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 MC4RP32245 332 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 NSG1P42857 185 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 LMAN1P49257 510 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 RNASEH2BQ5TBB1 312 aaKnown RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 KIAA0930Q6ICG6 404 aaPredicted RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 GALNT7Q86SF2 657 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 CCNJLQ8IV13 435 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 CHCHD4Q8N4Q1 142 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 OR13C4Q8NGS5 318 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLK4-209ENST00000521621 CCDC74AQ96AQ1 378 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 DNAJC1Q96KC8 554 aaKnown RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 TMEM74Q96NL1 305 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 COPS8Q99627 209 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 NAT9Q9BTE0 207 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 CARD6Q9BX69 1037 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 STN1Q9H668 368 aaKnown RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 SEMA5BQ9P283 1151 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 KLHL42Q9P2K6 505 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 KLK13Q9UKR3 277 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 ACSL6Q9UKU0 697 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 PCYT1BQ9Y5K3 369 aaPredicted RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 VPS13AQ96RL7 3174 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 DNALI1O14645 258 aaPredicted RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 HYAL3O43820 417 aaPredicted RBP9.31□□□□□ -0.92
CLK4-209ENST00000521621 USP12O75317 370 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 ASMTLO95671 621 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 ZSCAN5DPP0CG00 497 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 IDSP22304 550 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 IVDP26440 423 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 PAFAH1B1P43034 410 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 KCNJ1P48048 391 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 HES3Q5TGS1 186 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 AMZ2Q86W34 360 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 DNAAF3Q8N9W5 541 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 CCL4L1Q8NHW4 92 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 HM13Q8TCT9 377 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 LRRC39Q96DD0 335 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 NXPE2Q96DL1 559 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 APOL2Q9BQE5 337 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 LATS2Q9NRM7 1088 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 ZNHIT2Q9UHR6 403 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 KCTD3Q9Y597 815 aa9.31□□□□□ -0.92
CLK4-209ENST00000521621 FAM187AA6NFU0 413 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 HGSO14964 777 aaPredicted RBP9.3□□□□□ -0.92
CLK4-209ENST00000521621 FANCGO15287 622 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 ANKRD34CP0C6C1 535 aa9.3□□□□□ -0.92
CLK4-209ENST00000521621 OGNP20774 298 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms