RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 HDHD2Q9H0R4 259 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 MUC13Q9H3R2 512 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 ATP13A3Q9H7F0 1226 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 TRIM45Q9H8W5 580 aaPredicted RBP4.43□□□□□ -1.7
MATR3-219ENST00000512040 PFDN4Q9NQP4 134 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 SPTLC3Q9NUV7 552 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 LEF1Q9UJU2 399 aaPredicted RBP4.43□□□□□ -1.7
MATR3-219ENST00000512040 ANAPC2Q9UJX6 822 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 MTMR6Q9Y217 621 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 RAXQ9Y2V3 346 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 MAB21L2Q9Y586 359 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 PCDHB14Q9Y5E9 798 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 RBM8AQ9Y5S9 174 aaKnown RBP4.43□□□□□ -1.7
MATR3-219ENST00000512040 LYVE1Q9Y5Y7 322 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 POMT1Q9Y6A1 747 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 MTCH2Q9Y6C9 303 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 PLXNA3P51805 1871 aa4.43□□□□□ -1.7
MATR3-219ENST00000512040 CFAP47Q6ZTR5 3102 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 FAM95CA0A1B0GW59 222 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 TCRBV16S1A1N1A0A5B0 115 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 TMEM120BA0PK00 339 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 HMX2A2RU54 273 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 EFCAB10A6NFE3 127 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 FAM170BA6NMN3 283 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 MEIS3P2A8K0S8 358 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SYCE1LA8MT33 242 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 B8ZZF3 427 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 ARVCFO00192 962 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CBX4O00257 560 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 GPR171O14626 319 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 MAP2K7O14733 419 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 TSPAN4O14817 238 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 RASGRF2O14827 1237 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SLC30A4O14863 429 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 BET1O15155 118 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 MED7O43513 233 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 DENRO43583 198 aaKnown RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 SSX5O60225 188 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 NPHS1O60500 1241 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 TADA2AO75478 443 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CIB2O75838 187 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 IL18RAPO95256 599 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 PIGNO95427 931 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 NSA2O95478 260 aaKnown RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 TGM6O95932 706 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CHEK2O96017 543 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 ASS1P00966 412 aaKnown RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 PDGFBP01127 241 aaPredicted RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 APOA1P02647 267 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SOD2P04179 222 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 IGFBP1P08833 259 aaPredicted RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 CNPP09543 421 aaKnown RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 UMPSP11172 480 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 NCF1P14598 390 aaPredicted RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 SYT1P21579 422 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SP100P23497 879 aaPredicted RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 AHCYP23526 432 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 NR2F2P24468 414 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CCNE1P24864 410 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CD1BP29016 333 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CHRNA3P32297 505 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 IL12RB1P42701 662 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 ALDH3B1P43353 468 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 KRT6CP48668 564 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SLC11A2P49281 568 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 FNTBP49356 437 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 HSD17B4P51659 736 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SEC24CP53992 1094 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CCL23P55773 120 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 ATP5IP56385 69 aaPredicted RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 SNAP25P60880 206 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 UBE2HP62256 183 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 PSMC6P62333 389 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SPIBQ01892 262 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 GHRHRQ02643 423 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 ZNF33BQ06732 778 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 SCN1BQ07699 218 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 TBL3Q12788 808 aaKnown RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 ABRQ12979 859 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 PMS2P3Q13401 168 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 PPIGQ13427 754 aaKnown RBP eCLIP4.42□□□□□ -1.7
MATR3-219ENST00000512040 DRP2Q13474 957 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 GRM4Q14833 912 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 GPNMBQ14956 572 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 NR1D2Q14995 579 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 KARSQ15046 597 aaKnown RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 QRICH1Q2TAL8 776 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CCDC58Q4VC31 144 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 KLHL26Q53HC5 615 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 ARHGEF16Q5VV41 709 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 PRMT9Q6P2P2 845 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CNKSR3Q6P9H4 555 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 PSRC1Q6PGN9 363 aaPredicted RBP4.42□□□□□ -1.7
MATR3-219ENST00000512040 PAOXQ6QHF9 649 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 AFTPHQ6ULP2 937 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 CXCL17Q6UXB2 119 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 PRR23CQ6ZRP0 262 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 COLCA1Q6ZS62 124 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 MAEAQ7L5Y9 396 aa4.42□□□□□ -1.7
MATR3-219ENST00000512040 OTOP2Q7RTS6 562 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms