RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TEDDM1Q5T9Z0 273 aa17■□□□□ 0.31
LIME1-208ENST00000493265 LYPLAL1Q5VWZ2 237 aa17■□□□□ 0.31
LIME1-208ENST00000493265 CILP2Q8IUL8 1156 aa17■□□□□ 0.31
LIME1-208ENST00000493265 PPM1NQ8N819 430 aa17■□□□□ 0.31
LIME1-208ENST00000493265 DDHD1Q8NEL9 900 aa17■□□□□ 0.31
LIME1-208ENST00000493265 GPR150Q8NGU9 434 aa17■□□□□ 0.31
LIME1-208ENST00000493265 GABPB2Q8TAK5 448 aaPredicted RBP17■□□□□ 0.31
LIME1-208ENST00000493265 CDKL2Q92772 493 aa17■□□□□ 0.31
LIME1-208ENST00000493265 SGSM3Q96HU1 749 aa17■□□□□ 0.31
LIME1-208ENST00000493265 COX14Q96I36 57 aa17■□□□□ 0.31
LIME1-208ENST00000493265 WDR92Q96MX6 357 aa17■□□□□ 0.31
LIME1-208ENST00000493265 MRPL40Q9NQ50 206 aaKnown RBP17■□□□□ 0.31
LIME1-208ENST00000493265 FSCN3Q9NQT6 498 aa17■□□□□ 0.31
LIME1-208ENST00000493265 SMOXQ9NWM0 555 aa17■□□□□ 0.31
LIME1-208ENST00000493265 ATXN10Q9UBB4 475 aa17■□□□□ 0.31
LIME1-208ENST00000493265 FBXO5Q9UKT4 447 aa17■□□□□ 0.31
LIME1-208ENST00000493265 PRKAB1Q9Y478 270 aa17■□□□□ 0.31
LIME1-208ENST00000493265 PCDHGA5Q9Y5G8 931 aa17■□□□□ 0.31
LIME1-208ENST00000493265 PLXNB3Q9ULL4 1909 aa17■□□□□ 0.31
LIME1-208ENST00000493265 A0A087WUV0 522 aaPredicted RBP16.99■□□□□ 0.31
LIME1-208ENST00000493265 UQCRHLA0A096LP55 91 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 AGAP14A8MT82 685 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 PATE3B3GLJ2 98 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 CDK14O94921 469 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 UQCRHP07919 91 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 RALBP11234 206 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 OGNP20774 298 aaKnown RBP16.99■□□□□ 0.31
LIME1-208ENST00000493265 PPARGP37231 505 aaPredicted RBP16.99■□□□□ 0.31
LIME1-208ENST00000493265 TMEM115Q12893 351 aaPredicted RBP16.99■□□□□ 0.31
LIME1-208ENST00000493265 GTF2H3Q13889 308 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 PTK2BQ14289 1009 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 SLC29A2Q14542 456 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 BRD3Q15059 726 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 TCEA2Q15560 299 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 UAP1Q16222 522 aaPredicted RBP16.99■□□□□ 0.31
LIME1-208ENST00000493265 ZNF789Q5FWF6 425 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 PRAMEF14Q5SWL7 426 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 KCTD16Q68DU8 428 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 CRTC3Q6UUV7 619 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 CERS6Q6ZMG9 384 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 ADGRG6Q86SQ4 1221 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 FAM174AQ8TBP5 190 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 CAVIN3Q969G5 261 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 TSACCQ96A04 125 aaPredicted RBP16.99■□□□□ 0.31
LIME1-208ENST00000493265 SKA1Q96BD8 255 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 ATXN7L3BQ96GX2 97 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 CAAP1Q9H8G2 361 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 TRIM39Q9HCM9 518 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 KLQ9UEF7 1012 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 RABGEF1Q9UJ41 708 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 CRYL1Q9Y2S2 319 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 BPTFQ12830 3046 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 CFAP47Q6ZTR5 3102 aa16.99■□□□□ 0.31
LIME1-208ENST00000493265 LAMA1P25391 3075 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 FAM159BA6NKW6 160 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 OR2AG2A6NM03 316 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 CFAP99D6REC4 459 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 TOR1BO14657 336 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 VILLO15195 856 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 PFDN6O15212 129 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 HAUS5O94927 633 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 S1PR4O95977 384 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 CEACAM5P06731 702 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 ZNF8P17098 575 aaPredicted RBP16.98■□□□□ 0.31
LIME1-208ENST00000493265 KELP23276 732 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 FMO4P31512 558 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 HSD17B3P37058 310 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 EIF3BP55884 814 aaKnown RBP16.98■□□□□ 0.31
LIME1-208ENST00000493265 B4GALNT1Q00973 533 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 FZD2Q14332 565 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 DUOXA1Q1HG43 343 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 MACC1Q6ZN28 852 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 STRA8Q7Z7C7 330 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 IQCHQ86VS3 1027 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 SPATS2Q86XZ4 545 aaKnown RBP16.98■□□□□ 0.31
LIME1-208ENST00000493265 HID1Q8IV36 788 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 RBFAQ8N0V3 343 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 CLDN19Q8N6F1 224 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 RASGEF1AQ8N9B8 481 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 C2CD4AQ8NCU7 369 aaPredicted RBP16.98■□□□□ 0.31
LIME1-208ENST00000493265 OR56A4Q8NGH8 313 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 OR1E3Q8WZA6 343 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 SGF29Q96ES7 293 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 CYTH2Q99418 400 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 ZCCHC2Q9C0B9 1178 aaKnown RBP16.98■□□□□ 0.31
LIME1-208ENST00000493265 CLPBQ9H078 707 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 CYP4F12Q9HCS2 524 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 FGF22Q9HCT0 170 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 DNAJC28Q9NX36 388 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 TXNDC16Q9P2K2 825 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 ZNHIT2Q9UHR6 403 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 ANKRD6Q9Y2G4 727 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 PSAT1Q9Y617 370 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 CEP295Q9C0D2 2601 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 CHD6Q8TD26 2715 aa16.98■□□□□ 0.31
LIME1-208ENST00000493265 SPTY2D1-AS1A0A0U1RR47 76 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 POC1B-GALNT4F8VUJ3 575 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 MAGEC1O60732 1142 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 KCNK5O95279 499 aa16.97■□□□□ 0.31
LIME1-208ENST00000493265 HOXC4P09017 264 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms