RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 CEP76Q8TAP6 659 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 SCG3Q8WXD2 468 aaKnown RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 NELL1Q92832 810 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 TSACCQ96A04 125 aaPredicted RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ZBTB9Q96C00 473 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ZNF514Q96K75 400 aaPredicted RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 PAFAH2Q99487 392 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 BOCQ9BWV1 1114 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ACBD3Q9H3P7 528 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 CARS2Q9HA77 564 aaKnown RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 PLAC1Q9HBJ0 212 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 DNAJC28Q9NX36 388 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 ATXN10Q9UBB4 475 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 TBK1Q9UHD2 729 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 CNOT6Q9ULM6 557 aaKnown RBP10.41□□□□□ -0.74
UBE2F-220ENST00000472479 PRKAB1Q9Y478 270 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 PCDHB1Q9Y5F3 818 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 VCANP13611 3396 aa10.41□□□□□ -0.74
UBE2F-220ENST00000472479 A0A0C4DFX4 3053 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 NUMA1Q14980 2115 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 TRPM6Q9BX84 2022 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 TRBV5-4A0A0C4DH59 114 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 IQANK1A0A1B0GTG1 560 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 TMEM202A6NGA9 273 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 H3BMM5 538 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 RASGRF2O14827 1237 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 SCAMP1O15126 338 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 GRID2O43424 1007 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 LILRB5O75023 590 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 VPS26AO75436 327 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 FAM155BO75949 473 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 KRT37O76014 449 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 RASGRP1O95267 797 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 SOD1P00441 154 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 FTH1P02794 183 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 SHBGP04278 402 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 HOXC4P09017 264 aaPredicted RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 PKMP14618 531 aaKnown RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 ZNF8P17098 575 aaPredicted RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 VCLP18206 1134 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 KRT15P19012 456 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 CA5AP35218 305 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 LEPRP48357 1165 aaKnown RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 BLKP51451 505 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 CSE1LP55060 971 aaKnown RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 PFN3P60673 137 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 USP10Q14694 798 aaKnown RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 CASP8Q14790 479 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 TCEA2Q15560 299 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 INSCQ1MX18 579 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 TYSND1Q2T9J0 566 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 PLA2G4EQ3MJ16 856 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 KRT71Q3SY84 523 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 SYTL3Q4VX76 610 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 ZNF542PQ5EBM4 170 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 UGT3A1Q6NUS8 523 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 LAYNQ6UX15 382 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 RAPH1Q70E73 1250 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 CHST15Q7LFX5 561 aaPredicted RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 ABI3BPQ7Z7G0 1075 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 ADGRG6Q86SQ4 1221 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 LRRTM4Q86VH4 590 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 IQCHQ86VS3 1027 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 RASGEF1AQ8N9B8 481 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 DDHD1Q8NEL9 900 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 NAT14Q8WUY8 206 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 FAM136AQ96C01 138 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 VPS39Q96JC1 886 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 PANX3Q96QZ0 392 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 SLC13A1Q9BZW2 595 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 ARRDC1-AS1Q9H2J1 176 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 SMYD2Q9NRG4 433 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 GMEB2Q9UKD1 530 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 TMPRSS11EQ9UL52 423 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 SLC39A10Q9ULF5 831 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 DOLKQ9UPQ8 538 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 HCN4Q9Y3Q4 1203 aa10.4□□□□□ -0.74
UBE2F-220ENST00000472479 OAS3Q9Y6K5 1087 aaKnown RBP10.4□□□□□ -0.74
UBE2F-220ENST00000472479 A0A1B0GVT2 93 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 FAM95CA0A1B0GW59 222 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 AGAP14A8MT82 685 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 H3BM21 787 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 VILLO15195 856 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 KMOO15229 486 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 DNAJC6O75061 913 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 POP7O75817 140 aaKnown RBP10.39□□□□□ -0.75
UBE2F-220ENST00000472479 AP2A2O94973 939 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 ESR1P03372 595 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 SRP54P61011 504 aaKnown RBP10.39□□□□□ -0.75
UBE2F-220ENST00000472479 TMED2Q15363 201 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 ZNF789Q5FWF6 425 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 CEP85LQ5SZL2 805 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 MROH9Q5TGP6 573 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 FAM45BPQ6NSW5 357 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 MACC1Q6ZN28 852 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 CROCCP2Q86T23 111 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 CNTN4Q8IWV2 1026 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 KRT222Q8N1A0 295 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 PRSS33Q8NF86 280 aa10.39□□□□□ -0.75
UBE2F-220ENST00000472479 FAM45AQ8TCE6 357 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms