RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 RABL3Q5HYI8 236 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 PAGE3Q5JUK9 113 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 GPSM1Q86YR5 675 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 SPNS2Q8IVW8 549 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 SPATA17Q96L03 361 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 SLC30A3Q99726 388 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 CINPQ9BW66 212 aaPredicted RBP16.71■□□□□ 0.27
SNHG17-207ENST00000449469 FAM50BQ9Y247 325 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 AP3M1Q9Y2T2 418 aa16.71■□□□□ 0.27
SNHG17-207ENST00000449469 NPEPPSL1A6NEC2 478 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 PRSS23O95084 383 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 MTHFD1P11586 935 aaKnown RBP16.7■□□□□ 0.26
SNHG17-207ENST00000449469 JUNBP17275 347 aaPredicted RBP16.7■□□□□ 0.26
SNHG17-207ENST00000449469 LPOP22079 712 aaPredicted RBP16.7■□□□□ 0.26
SNHG17-207ENST00000449469 UFM1P61960 85 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 TUBA3CQ13748 450 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 LYSMD3Q7Z3D4 306 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 STK40Q8N2I9 435 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 OR4K2Q8NGD2 314 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 OR8J3Q8NGG0 315 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 VPS33AQ96AX1 596 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 BIRC7Q96CA5 298 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 NRBF2Q96F24 287 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 CCDC115Q96NT0 180 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 UBA2Q9UBT2 640 aaPredicted RBP16.7■□□□□ 0.26
SNHG17-207ENST00000449469 EBF1Q9UH73 591 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 TIMM22Q9Y584 194 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 CDC7O00311 574 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 SYNCRIPO60506 623 aaKnown RBP16.7■□□□□ 0.26
SNHG17-207ENST00000449469 GMNNO75496 209 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 RAP2AP10114 183 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 HOXD9P28356 352 aaPredicted RBP16.7■□□□□ 0.26
SNHG17-207ENST00000449469 ALDH3A2P51648 485 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 GNA12Q03113 381 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 PTPRCAPQ14761 206 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 RAB39AQ14964 217 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 PTPRNQ16849 979 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 SMU1Q2TAY7 513 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 TIGD2Q4W5G0 525 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 C6orf136Q5SQH8 315 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 KLHL35Q6PF15 583 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 ZNF773Q6PK81 442 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 IFNEQ86WN2 208 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 MIB1Q86YT6 1006 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 RIMKLAQ8IXN7 391 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 FNDC5Q8NAU1 212 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 PDPRQ8NCN5 879 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 BORCS5Q969J3 196 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 FBXL20Q96IG2 436 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 MAGED4Q96JG8 741 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 CHID1Q9BWS9 393 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 MUC3BQ9H195 1237 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 RPF2Q9H7B2 306 aaKnown RBP16.7■□□□□ 0.26
SNHG17-207ENST00000449469 PALMDQ9NP74 551 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 TBC1D23Q9NUY8 699 aa16.7■□□□□ 0.26
SNHG17-207ENST00000449469 C9JVG2 144 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 H3BMQ9 156 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 E2F3O00716 465 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 INSIG1O15503 277 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 TSPAN12O95859 305 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 ESR1P03372 595 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 GPR15P49685 360 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 GALK1P51570 392 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 TMBIM6P55061 237 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 CDH4P55283 916 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 CBX2Q14781 532 aaPredicted RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 FAM98BQ52LJ0 330 aaKnown RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 SDHAF4Q5VUM1 108 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 RNF165Q6ZSG1 346 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 PROKR1Q8TCW9 393 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 MAGEE2Q8TD90 523 aaPredicted RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 RMDN1Q96DB5 314 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 THAP11Q96EK4 314 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 PDLIM5Q96HC4 596 aaKnown RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 TEX37Q96LM6 180 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 COG8Q96MW5 612 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 POLR1BQ9H9Y6 1135 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 LIN28AQ9H9Z2 209 aaKnown RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 CHD5Q8TDI0 1954 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 A0A1B0GTL3 188 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 H7C0S8 307 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 KATNA1O75449 491 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 CYBAP13498 195 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 MSH3P20585 1137 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 HRH2P25021 359 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 GRK4P32298 578 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 PCBP2Q15366 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 RBM48Q5RL73 367 aaKnown RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 VARS2Q5ST30 1063 aaKnown RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 GLYATQ6IB77 296 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 C17orf99Q6UX52 265 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 CIR1Q86X95 450 aaPredicted RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 SFRP1Q8N474 314 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 CARNMT1Q8N4J0 409 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 VPS50Q96JG6 964 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 TDRD1Q9BXT4 1180 aaKnown RBP16.69■□□□□ 0.26
SNHG17-207ENST00000449469 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
SNHG17-207ENST00000449469 CD274Q9NZQ7 290 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms