RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TNFSF14O43557 240 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF500O60304 480 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 DNAJC6O75061 913 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 USP1O94782 785 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 VAPBO95292 243 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ACP5P13686 325 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ATP1B2P14415 290 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF7P17097 686 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 PGAM1P18669 254 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 PSMA3P25788 255 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 IVDP26440 423 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 NMBRP28336 390 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 NSG1P42857 185 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 MRPS25P82663 173 aaKnown RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 CTBSQ01459 385 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ITIH4Q14624 930 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 NR0B2Q15466 257 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 TRIP6Q15654 476 aaKnown RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 C6orf132Q5T0Z8 1188 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF648Q5T619 568 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 RNF187Q5TA31 235 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 DUPD1Q68J44 220 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 SLC30A9Q6PML9 568 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 PIP4P1Q86T03 277 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 MPP5Q8N3R9 675 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 OR6C4Q8NGE1 309 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 GPBAR1Q8TDU6 330 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 MFSD3Q96ES6 412 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 STN1Q9H668 368 aaKnown RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 TREX1Q9NSU2 369 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 DLL3Q9NYJ7 618 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 GULP1Q9UBP9 304 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 APOBEC2Q9Y235 224 aaKnown RBP13.92□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF292O60281 2723 aa13.92□□□□□ -0.18
SSBP3-208ENST00000444533 DCDC2BA2VCK2 349 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 OR2AG2A6NM03 316 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 AGAP14A8MT82 685 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 B4DGG1 531 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 CHUKO15111 745 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 CD3EAPO15446 510 aaKnown RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 GPR39O43194 453 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 SIGLEC6O43699 453 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 NDUFS3O75489 264 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 AP2A2O94973 939 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 GSTM1P09488 218 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 CDK4P11802 303 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 CKMT2P17540 419 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 DEKP35659 375 aaKnown RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 MAGEA3P43357 314 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 ARSDP51689 593 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 DRG2P55039 364 aaKnown RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 GSTM4Q03013 218 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 DHX9Q08211 1270 aaKnown RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 LONRF1Q17RB8 773 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 ANKRD20A4Q4UJ75 823 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 FNBP1LQ5T0N5 605 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 KIAA0930Q6ICG6 404 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 PSAPL1Q6NUJ1 521 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 TMEM220Q6QAJ8 160 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 DET1Q7L5Y6 550 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 AMZ2Q86W34 360 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 LMNTD2Q8IXW0 634 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 ARL10Q8N8L6 244 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 FAM181AQ8N9Y4 354 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 AVL9Q8NBF6 648 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 ZNF778Q96MU6 729 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 CAMK1GQ96NX5 476 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 EBNA1BP2Q99848 306 aaKnown RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 TIMM29Q9BSF4 260 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 LRRC1Q9BTT6 524 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 CARD6Q9BX69 1037 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 FAM129AQ9BZQ8 928 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 FOXP3Q9BZS1 431 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 CLPBQ9H078 707 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 FAM114A2Q9NRY5 505 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 KLC4Q9NSK0 619 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 TAAR2Q9P1P5 351 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 SIRPGQ9P1W8 387 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 MTRF1LQ9UGC7 380 aaKnown RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 PNMA8BQ9ULN7 279 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-208ENST00000444533 BTBD3Q9Y2F9 522 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 PRKAB1Q9Y478 270 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 WDR87Q6ZQQ6 2873 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 SCN8AQ9UQD0 1980 aa13.91□□□□□ -0.18
SSBP3-208ENST00000444533 LAMA1P25391 3075 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 CABIN1Q9Y6J0 2220 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 TRBV5-4A0A0C4DH59 114 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 OR51F1A6NGY5 319 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 EIF3HO15372 352 aaKnown RBP eCLIP13.9□□□□□ -0.18
SSBP3-208ENST00000444533 SNX2O60749 519 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 FTH1P02794 183 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 OR56A5P0C7T3 313 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 IDSP22304 550 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 FOXN2P32314 431 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 HALP42357 657 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 PLTPP55058 493 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 SIM1P81133 766 aaPredicted RBP13.9□□□□□ -0.18
SSBP3-208ENST00000444533 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
SSBP3-208ENST00000444533 GUCY2DQ02846 1103 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms