RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 ZNF577Q9BSK1 485 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SPATA16Q9BXB7 569 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC46A2Q9BY10 475 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TMPRSS13Q9BYE2 586 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GLIS2Q9BZE0 524 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CTDSP1Q9GZU7 261 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CLPBQ9H078 707 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TMEM168Q9H0V1 697 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TMEM245Q9H330 911 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 LDAHQ9H6V9 325 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MINDY3Q9H8M7 445 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SRD5A3Q9H8P0 318 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 CNOT10Q9H9A5 744 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FN3KRPQ9HA64 309 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 UPF2Q9HAU5 1272 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GPR35Q9HC97 309 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 VAT1LQ9HCJ6 419 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 TRPC7Q9HCX4 862 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ASAH2Q9NR71 780 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 THAP1Q9NVV9 213 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 P4HTMQ9NXG6 502 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 GPRC5DQ9NZD1 345 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 BTBD7Q9P203 1132 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 KLHL9Q9P2J3 617 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC24A2Q9UI40 661 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 FBXW11Q9UKB1 542 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 VPS4AQ9UN37 437 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 NSFL1CQ9UNZ2 370 aaKnown RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 PLCL2Q9UPR0 1127 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF148Q9UQR1 794 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 UBE2J1Q9Y385 318 aaPredicted RBP3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 MAD1L1Q9Y6D9 718 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 RNF215Q9Y6U7 377 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF536O15090 1300 aa3.11□□□□□ -1.91
CTDSPL-203ENST00000416688 KIF27Q86VH2 1401 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 A0A0A6YYC8 382 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 A0A0U1RQJ8 604 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 A0A1B0GUA9 196 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SHISA3A0PJX4 238 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LNP1A1A4G5 178 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PIPSLA2A3N6 862 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM149AA5PLN7 773 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MEGF11A6BM72 1044 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PRSS29PA6NIE9 313 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 AGAP5A6NIR3 686 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 C4orf47A7E2U8 309 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF785A8K8V0 405 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 A8MUI8 341 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ADARB2-AS1A8MUL3 147 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 TCP11X1B4DZS4 312 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SUPT3HB4E1H0 165 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 H3BMM5 538 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 I3L1I5 382 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF701M0R085 212 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LDLRAD4O15165 306 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CHADO15335 359 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RRP8O43159 456 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 HBP1O60381 514 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CDH16O75309 829 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 VPS4BO75351 444 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC43A1O75387 559 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CBR3O75828 277 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MYO1DO94832 1006 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CDK14O94921 469 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PRSS23O95084 383 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 OR6A2O95222 327 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 TGM6O95932 706 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CXCL10P02778 98 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 OR52Z1P0C646 297 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LINGO3P0C6S8 592 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MYZAPP0CAP1 466 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF888P0CJ79 500 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 STAG3L2P0CL84 134 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 OR8G3PP0DMU2 310 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 VPREB1P12018 145 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MMP9P14780 707 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 GNAZP19086 355 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PTNP21246 168 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 DRD4P21917 467 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 DRD5P21918 477 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PTGS1P23219 599 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MGAT1P26572 445 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 YWHAQP27348 245 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CDC25AP30304 524 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LRPAP1P30533 357 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 VIPR1P32241 457 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 THBS4P35443 961 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CLK3P49761 638 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 GNAQP50148 359 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PSMD7P51665 324 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RPS6KA3P51812 740 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF75DP51815 510 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF135P52742 658 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CRYBB1P53674 252 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 F2RL1P55085 397 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ITGA1P56199 1179 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 VBP1P61758 197 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 IRX4P78413 519 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms