RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PTPRNQ16849 979 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 FAM26DQ5JW98 314 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 C6orf136Q5SQH8 315 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 ZNF280BQ86YH2 543 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 LRRC43Q8N309 656 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CHCHD4Q8N4Q1 142 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 PROKR1Q8TCW9 393 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 MAGEE2Q8TD90 523 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 ISG20Q96AZ6 181 aaKnown RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 BIRC7Q96CA5 298 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 RMDN1Q96DB5 314 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 FBXL20Q96IG2 436 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 NSMCE2Q96MF7 247 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 SLC30A3Q99726 388 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CINPQ9BW66 212 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 RPF2Q9H7B2 306 aaKnown RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 PCDHB3Q9Y5E6 796 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 ARNTLO00327 626 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 INSIG1O15503 277 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 SYNCRIPO60506 623 aaKnown RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 TSPAN12O95859 305 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CDH1P12830 882 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CYBAP13498 195 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 NCK1P16333 377 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 LPOP22079 712 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 VARSP26640 1264 aaKnown RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 HOXD9P28356 352 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 OR1G1P47890 313 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 AGTR2P50052 363 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 HLCSP50747 726 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 IL2P60568 153 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 GNA12Q03113 381 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CRY1Q16526 586 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 VARS2Q5ST30 1063 aaKnown RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CCNYL2Q5T2Q4 361 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 NADSYN1Q6IA69 706 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 GLYATQ6IB77 296 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 LYSMD3Q7Z3D4 306 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 GPSM1Q86YR5 675 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 AADATQ8N5Z0 425 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 FNDC5Q8NAU1 212 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 MDGA1Q8NFP4 955 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 OR2T11Q8NH01 316 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 FNDC8Q8TC99 324 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 BPIFB1Q8TDL5 484 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 KCNJ9Q92806 393 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CHID1Q9BWS9 393 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 TMEM9Q9P0T7 183 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 GALPQ9UBC7 116 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 UBA2Q9UBT2 640 aaPredicted RBP10.63□□□□□ -0.71
CLIP4-204ENST00000404424 SPO11Q9Y5K1 396 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 CROCCQ5TZA2 2017 aa10.63□□□□□ -0.71
CLIP4-204ENST00000404424 GBF1Q92538 1859 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 TRIM64BA6NI03 449 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 NCF1BA6NI72 391 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 OR6C75A6NL08 312 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 NCF1CA8MVU1 366 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 E2F3O00716 465 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 B4GALT3O60512 393 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CELF2O95319 508 aaKnown RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 NCF1P14598 390 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 HRH2P25021 359 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 IL12AP29459 219 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 HMOX2P30519 316 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 GALK1P51570 392 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 PMS2P3Q13401 168 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 RAB39AQ14964 217 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CTXN3Q4LDR2 81 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 TIGD2Q4W5G0 525 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 FBXO48Q5FWF7 155 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 UGT3A1Q6NUS8 523 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 KLHL35Q6PF15 583 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 RIMKLAQ8IXN7 391 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 LGI2Q8N0V4 545 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 ATAD1Q8NBU5 361 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 VPS50Q96JG6 964 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 SPATA17Q96L03 361 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 TMEM74Q96NL1 305 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 TRIM8Q9BZR9 551 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 HEBP1Q9NRV9 189 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CD274Q9NZQ7 290 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 SLAMF8Q9P0V8 285 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 ZFC3H1O60293 1989 aaKnown RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 A0A0D9SEW6 157 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 SH3PXD2BA1X283 911 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 ENPP3O14638 875 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 DEAF1O75398 565 aaPredicted RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 OR4F21O95013 312 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CLIC3O95833 236 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 ALBP02768 609 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CR2P20023 1033 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CASP2P42575 452 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 HK3P52790 923 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 CDH4P55283 916 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 GRSF1Q12849 480 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 AARS2Q5JTZ9 985 aaKnown RBP10.62□□□□□ -0.71
CLIP4-204ENST00000404424 Q6ZSR9 355 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 FKBP9P1Q75LS8 142 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 KLHDC9Q8NEP7 349 aa10.62□□□□□ -0.71
CLIP4-204ENST00000404424 MIPOL1Q8TD10 442 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms