RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 NXPH1P58417 271 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 DUOXA1Q1HG43 343 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 KLHL38Q2WGJ6 581 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 PACS1Q6VY07 963 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 MARK2Q7KZI7 788 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 STRA8Q7Z7C7 330 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 RASGEF1AQ8N9B8 481 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 CEP76Q8TAP6 659 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 NAT14Q8WUY8 206 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 HNRNPLLQ8WVV9 542 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 LPGAT1Q92604 370 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 MRRFQ96E11 262 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 CLPBQ9H078 707 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 ARRDC1-AS1Q9H2J1 176 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 ARGLU1Q9NWB6 273 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 TXNDC16Q9P2K2 825 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 KLQ9UEF7 1012 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 SLC17A4Q9Y2C5 497 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 CRYL1Q9Y2S2 319 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 PCDHGA5Q9Y5G8 931 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 PSAT1Q9Y617 370 aa23.32■■□□□ 1.32
TSPAN4-203ENST00000397397 BPTFQ12830 3046 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 HAUS5O94927 633 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 AHSGP02765 367 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 CFIP05156 583 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 EIF3BP55884 814 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 FZD2Q14332 565 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 SPATS2Q86XZ4 545 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 FGF22Q9HCT0 170 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 MRPL40Q9NQ50 206 aaKnown RBP23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 ANKRD6Q9Y2G4 727 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 PRSS21Q9Y6M0 314 aa23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 TP53BP1Q12888 1972 aaPredicted RBP23.31■■□□□ 1.32
TSPAN4-203ENST00000397397 PRMT5O14744 637 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 TNFRSF10CO14798 259 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 GABRB3P28472 473 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 FMO4P31512 558 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 MPLP40238 635 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 CD151P48509 253 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 BEND6Q5SZJ8 279 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 CNSTQ6PJW8 725 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 TMEM220Q6QAJ8 160 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 GALNT7Q86SF2 657 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 LRRC6Q86X45 466 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 CLDN19Q8N6F1 224 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 SUMF1Q8NBK3 374 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 OR1E3Q8WZA6 343 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 TSACCQ96A04 125 aaPredicted RBP23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 SGF29Q96ES7 293 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 CPNE1Q99829 537 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 CCDC77Q9BR77 488 aa23.3■■□□□ 1.32
TSPAN4-203ENST00000397397 EXOC1LA0A1B0GW35 172 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 PRSS38A1L453 326 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 OR2AG2A6NM03 316 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 GPR89AB7ZAQ6 455 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 POC1B-GALNT4F8VUJ3 575 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 NUAK1O60285 661 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 LMNAP02545 664 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 IVLP07476 585 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 GPR89BP0CG08 455 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 ABCG1P45844 678 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 CTSCP53634 463 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 SRP54P61011 504 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 EIF2B5Q13144 721 aaKnown RBP23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 KCTD16Q68DU8 428 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 RD3Q7Z3Z2 195 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 PARGQ86W56 976 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 P2RY12Q9H244 342 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 RMI1Q9H9A7 625 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 CYP4F12Q9HCS2 524 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 SUFUQ9UMX1 484 aa23.29■■□□□ 1.32
TSPAN4-203ENST00000397397 PATE3B3GLJ2 98 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 DNAJC6O75061 913 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 AP2A2O94973 939 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 SHBGP04278 402 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 H2AFXP16104 143 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 RPS3P23396 243 aaKnown RBP eCLIP23.28■■□□□ 1.326e-8■■■■■ 37.4
TSPAN4-203ENST00000397397 GP5P40197 560 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 GNPDA1P46926 289 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 CSE1LP55060 971 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 CCDC6Q16204 474 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 ALG11Q2TAA5 492 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 KIF19Q2TAC6 998 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 TRIM61Q5EBN2 209 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 PTRHD1Q6GMV3 140 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 CRTC3Q6UUV7 619 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 TRAPPC5Q8IUR0 188 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 HID1Q8IV36 788 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 PDXPQ96GD0 296 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 CCDC68Q9H2F9 335 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 CARS2Q9HA77 564 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 ZNHIT2Q9UHR6 403 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 GNPTGQ9UJJ9 305 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 PRKAB1Q9Y478 270 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 PCDHB1Q9Y5F3 818 aa23.28■■□□□ 1.32
TSPAN4-203ENST00000397397 CHUKO15111 745 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 GRID2O43424 1007 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 SGTAO43765 313 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 LRP4O75096 1905 aa23.27■■□□□ 1.32
TSPAN4-203ENST00000397397 FAM155BO75949 473 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms