RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 OGFRQ9NZT2 677 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 EPHA6Q9UF33 1036 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 KCND3Q9UK17 655 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 SHOC2Q9UQ13 582 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 HEY1Q9Y5J3 304 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.85■■□□□ 1.25
C9orf47-202ENST00000375850 BSNQ9UPA5 3926 aa22.85■■□□□ 1.25
C9orf47-202ENST00000375850 LRRD1A4D1F6 860 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 GOLGA6L3A6NEY3 463 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 PRR19A6NJB7 356 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 GOLGA6L19H0YKK7 550 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 APOL1O14791 398 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 CDK14O94921 469 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 MT-ND3P03897 115 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 TPM3P06753 285 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 IDSP22304 550 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 SLC19A1P41440 591 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 CAPZBP47756 277 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 GFERP55789 205 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 LACTB2Q53H82 288 aaPredicted RBP22.84■■□□□ 1.25
C9orf47-202ENST00000375850 ZDHHC20Q5W0Z9 365 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 CRTC3Q6UUV7 619 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 DTX3LQ8TDB6 740 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 BRSK1Q8TDC3 778 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 TADA1Q96BN2 335 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 ABHD17AQ96GS6 310 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 TGM7Q96PF1 710 aa22.84■■□□□ 1.25
C9orf47-202ENST00000375850 ZNF624Q9P2J8 865 aaPredicted RBP22.84■■□□□ 1.25
C9orf47-202ENST00000375850 NDST3O95803 873 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 TMEM253P0C7T8 217 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 ARHGAP25P42331 645 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 C16orf46Q6P387 395 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 BZW1Q7L1Q6 419 aaKnown RBP22.83■■□□□ 1.25
C9orf47-202ENST00000375850 LUZP1Q86V48 1076 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 CPNE8Q86YQ8 564 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 LRRN4Q8WUT4 740 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 STAMBPL1Q96FJ0 436 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 OLFM3Q96PB7 478 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 TRABDQ9H4I3 376 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 ARFGAP3Q9NP61 516 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 ZNF71Q9NQZ8 489 aaPredicted RBP22.83■■□□□ 1.25
C9orf47-202ENST00000375850 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.83■■□□□ 1.25
C9orf47-202ENST00000375850 SCHIP1Q9P0W5 487 aaPredicted RBP22.83■■□□□ 1.25
C9orf47-202ENST00000375850 SLC23A2Q9UGH3 650 aa22.83■■□□□ 1.25
C9orf47-202ENST00000375850 RASSF9O75901 435 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 FGF5P12034 268 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 BPIP17213 487 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 TYRP1P17643 537 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 DLSTP36957 453 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 HALP42357 657 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 SRSF1Q07955 248 aaKnown RBP eCLIP22.82■■□□□ 1.24
C9orf47-202ENST00000375850 KLRB1Q12918 225 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 GTF2H3Q13889 308 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.82■■□□□ 1.24
C9orf47-202ENST00000375850 LRRC38Q5VT99 294 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 KLHL35Q6PF15 583 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 RASGRP3Q8IV61 690 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 KLHL6Q8WZ60 621 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 SEC14L1Q92503 715 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 CXorf40BQ96DE9 158 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 AGAP3Q96P47 875 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 FCRL4Q96PJ5 515 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 OR6C1Q96RD1 312 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 SLC40A1Q9NP59 571 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 POLHQ9Y253 713 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 SLC30A1Q9Y6M5 507 aa22.82■■□□□ 1.24
C9orf47-202ENST00000375850 SSU72P8A0A1W2PR75 194 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 MKRN2OSH3BPM6 223 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 NDUFA10O95299 355 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 CCNYL3P0C7X3 344 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 CASP14P31944 242 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 HMGCLP35914 325 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 UBAP2LQ14157 1087 aaKnown RBP22.81■■□□□ 1.24
C9orf47-202ENST00000375850 MESDQ14696 234 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 ODF2Q5BJF6 829 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 ZNF648Q5T619 568 aaPredicted RBP22.81■■□□□ 1.24
C9orf47-202ENST00000375850 BPHLQ86WA6 291 aaPredicted RBP22.81■■□□□ 1.24
C9orf47-202ENST00000375850 ZNF547Q8IVP9 402 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 TTC25Q96NG3 672 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 ZCCHC2Q9C0B9 1178 aaKnown RBP22.81■■□□□ 1.24
C9orf47-202ENST00000375850 DEF6Q9H4E7 631 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 CROTQ9UKG9 612 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 DNAJC16Q9Y2G8 782 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 PCDHGA6Q9Y5G7 932 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 KCNMB2Q9Y691 235 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 PTPN13Q12923 2485 aa22.81■■□□□ 1.24
C9orf47-202ENST00000375850 A0A0A6YYK5 440 aaPredicted RBP22.8■■□□□ 1.24
C9orf47-202ENST00000375850 CYSRT1A8MQ03 144 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 SLC4A1P02730 911 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 PIRTP0C851 137 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 TNNT3P45378 269 aaPredicted RBP22.8■■□□□ 1.24
C9orf47-202ENST00000375850 NR2C2P49116 596 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 SEPHS1P49903 392 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 PCSK7Q16549 785 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 PLA2G4EQ3MJ16 856 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 TEX44Q53QW1 395 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 CACHD1Q5VU97 1274 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 TCTN3Q6NUS6 607 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 PPP1R3BQ86XI6 285 aa22.8■■□□□ 1.24
C9orf47-202ENST00000375850 UBXN4Q92575 508 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms