RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 HACD3Q9P035 362 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 MAGED1Q9Y5V3 778 aaPredicted RBP11.43□□□□□ -0.58
CCND1-201ENST00000227507 LRRC37AA6NMS7 1700 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 SSC5DA1L4H1 1573 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 RGPD3A6NKT7 1758 aaPredicted RBP11.43□□□□□ -0.58
CCND1-201ENST00000227507 FAM47E-STBD1D6RA91 191 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 HGFP14210 728 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 RAB30Q15771 203 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 RAP1GAP2Q684P5 730 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 RGPD4Q7Z3J3 1758 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 C8orf59Q8N0T1 100 aaPredicted RBP11.43□□□□□ -0.58
CCND1-201ENST00000227507 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.43□□□□□ -0.58
CCND1-201ENST00000227507 CSGALNACT1Q8TDX6 532 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 CHPT1Q8WUD6 406 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 TRUB1Q8WWH5 349 aaKnown RBP11.43□□□□□ -0.58
CCND1-201ENST00000227507 TMEM74Q96NL1 305 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 RHOJQ9H4E5 214 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 ZNHIT2Q9UHR6 403 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 CNOT11Q9UKZ1 510 aaKnown RBP11.43□□□□□ -0.58
CCND1-201ENST00000227507 ORC6Q9Y5N6 252 aa11.43□□□□□ -0.58
CCND1-201ENST00000227507 FGF10O15520 208 aaPredicted RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 HS6ST1O60243 411 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ERCC2P18074 760 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 SLC11A1P49279 550 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 COPZ1P61923 177 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 GPM6BQ13491 265 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ESRP1Q6NXG1 681 aaKnown RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 C11orf74Q86VG3 221 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ALDH16A1Q8IZ83 802 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 DCBLD1Q8N8Z6 715 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 KDM1BQ8NB78 822 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 TRPV1Q8NER1 839 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ZNF420Q8TAQ5 688 aaPredicted RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 SUN5Q8TC36 379 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 RAB2BQ8WUD1 216 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 TMEM174Q8WUU8 243 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 TMEM40Q8WWA1 233 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 FIG4Q92562 907 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 NSMCE2Q96MF7 247 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 FICDQ9BVA6 458 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 LHPPQ9H008 270 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 IL23AQ9NPF7 189 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 MTRRQ9UBK8 725 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 CRYL1Q9Y2S2 319 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 TIMM22Q9Y584 194 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 PCDHGA3Q9Y5H0 932 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ATAD5Q96QE3 1844 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 HAS3O00219 553 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 PPEF2O14830 753 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 AQP9O43315 295 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ALDH1A2O94788 518 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 FOSL1P15407 271 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ALOX12P18054 663 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ADSLP30566 484 aaPredicted RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 HPCAL1P37235 193 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 HERC3Q15034 1050 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 TIGD2Q4W5G0 525 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 NEPROQ6NW34 567 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 SPESP1Q6UW49 350 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 AGMOQ6ZNB7 445 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 TPGS1Q6ZTW0 290 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 R3HCC1LQ7Z5L2 792 aaKnown RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 DSG4Q86SJ6 1040 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 MIER2Q8N344 545 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 KREMEN2Q8NCW0 462 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 SNX19Q92543 992 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 SGCDQ92629 289 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 CHID1Q9BWS9 393 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ELAC1Q9H777 363 aaKnown RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 TRIM39Q9HCM9 518 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 NT5MQ9NPB1 228 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 PTBP2Q9UKA9 531 aaKnown RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 ARPC2O15144 300 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 MDM4O15151 490 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 MT-CYBP00156 380 aaPredicted RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 C8AP07357 584 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 RAB15P59190 212 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 PITX1P78337 314 aaPredicted RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 CHRNB3Q05901 458 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 SLC25A52Q3SY17 297 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 BRMS1LQ5PSV4 323 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 TMEM236Q5W0B7 351 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 SLC26A9Q7LBE3 791 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 STRADAQ7RTN6 431 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 AKAP14Q86UN6 197 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 GATAD2AQ86YP4 633 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ZDHHC13Q8IUH4 622 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 RORBQ92753 470 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 SLC9A7Q96T83 725 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 REXO4Q9GZR2 422 aaKnown RBP11.42□□□□□ -0.58
CCND1-201ENST00000227507 RNF38Q9H0F5 515 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 CPQQ9Y646 472 aa11.42□□□□□ -0.58
CCND1-201ENST00000227507 ERI2A8K979 691 aaKnown RBP11.41□□□□□ -0.58
CCND1-201ENST00000227507 SCAMP3O14828 347 aaKnown RBP11.41□□□□□ -0.58
CCND1-201ENST00000227507 STX7O15400 261 aaKnown RBP11.41□□□□□ -0.58
CCND1-201ENST00000227507 TBX1O43435 398 aa11.41□□□□□ -0.58
CCND1-201ENST00000227507 CDH17Q12864 832 aa11.41□□□□□ -0.58
CCND1-201ENST00000227507 TRAP1Q12931 704 aaKnown RBP11.41□□□□□ -0.58
CCND1-201ENST00000227507 MEP1AQ16819 746 aa11.41□□□□□ -0.58
CCND1-201ENST00000227507 ATAT1Q5SQI0 421 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms