RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TRIM64BA6NI03 449 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 C2orf81A6NN90 581 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 B4GALT3O60512 393 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 TULP3O75386 442 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 TSPAN12O95859 305 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 HMBSP08397 361 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 TACR2P21452 398 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 HRH2P25021 359 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 HOXD9P28356 352 aaPredicted RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 TTPAP49638 278 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 PMS2P3Q13401 168 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 CRY1Q16526 586 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 PTPRNQ16849 979 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 C5orf22Q49AR2 442 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 ATP6AP1LQ52LC2 224 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 C6orf136Q5SQH8 315 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 CCNYL2Q5T2Q4 361 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 NADSYN1Q6IA69 706 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 OR2T11Q8NH01 316 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 MAGEE2Q8TD90 523 aaPredicted RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 CHID1Q9BWS9 393 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 HEBP1Q9NRV9 189 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 TMEM9Q9P0T7 183 aa13.18□□□□□ -0.3
SRP54-201ENST00000216774 HEMK1Q9Y5R4 338 aaPredicted RBP13.18□□□□□ -0.3
SRP54-201ENST00000216774 GBF1Q92538 1859 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 hCG_2014768A0A024R1R8 64 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 SH3PXD2BA1X283 911 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 F5H5T6 163 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 H3BMQ9 156 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 E2F3O00716 465 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 CLIC3O95833 236 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 CDH1P12830 882 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 PKMP14618 531 aaKnown RBP13.17□□□□□ -0.3
SRP54-201ENST00000216774 STT3AP46977 705 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 HLCSP50747 726 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 IL2P60568 153 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 RAB39AQ14964 217 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 TAF1CQ15572 869 aaPredicted RBP13.17□□□□□ -0.3
SRP54-201ENST00000216774 FBXO48Q5FWF7 155 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 UGT3A1Q6NUS8 523 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 GPSM1Q86YR5 675 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 RIMKLAQ8IXN7 391 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 OFCC1Q8IZS5 231 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 FNDC5Q8NAU1 212 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 PROKR1Q8TCW9 393 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 RMDN1Q96DB5 314 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 MYEOVQ96EZ4 313 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 NSMCE2Q96MF7 247 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 COG8Q96MW5 612 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 TMEM74Q96NL1 305 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.17□□□□□ -0.3
SRP54-201ENST00000216774 POLR1BQ9H9Y6 1135 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 INTS7Q9NVH2 962 aaKnown RBP13.17□□□□□ -0.3
SRP54-201ENST00000216774 GALPQ9UBC7 116 aa13.17□□□□□ -0.3
SRP54-201ENST00000216774 TRMT6Q9UJA5 497 aaKnown RBP13.17□□□□□ -0.3
SRP54-201ENST00000216774 NCF1BA6NI72 391 aaPredicted RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 NCF1CA8MVU1 366 aaPredicted RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 IFRD1O00458 451 aaPredicted RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 SYN3O14994 580 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 SYNCRIPO60506 623 aaKnown RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 SNAP29O95721 258 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 NCF1P14598 390 aaPredicted RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 IL12AP29459 219 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 CASP2P42575 452 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 NKX3-2P78367 333 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 GNA12Q03113 381 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 TAF10Q12962 218 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 TMED1Q13445 227 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 VARS2Q5ST30 1063 aaKnown RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 C17orf99Q6UX52 265 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 GPR152Q8TDT2 470 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 ACOX2Q99424 681 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 C1orf50Q9BV19 199 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 CINPQ9BW66 212 aaPredicted RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 TBCCD1Q9NVR7 557 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 IRAK4Q9NWZ3 460 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 SLAMF8Q9P0V8 285 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 COMMD10Q9Y6G5 202 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 A0A0D9SEW6 157 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 ARNTLO00327 626 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 ENPP3O14638 875 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 INSIG1O15503 277 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 PRSS23O95084 383 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 EOMESO95936 686 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 CYBAP13498 195 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 LPOP22079 712 aaPredicted RBP13.16□□□□□ -0.3
SRP54-201ENST00000216774 CES1P23141 567 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 HMOX2P30519 316 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 ENTPD1P49961 510 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 CLCN4P51793 760 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 FAM26DQ5JW98 314 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 KCTD8Q6ZWB6 473 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 LGI2Q8N0V4 545 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 CHCHD4Q8N4Q1 142 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 AADATQ8N5Z0 425 aa13.16□□□□□ -0.3
SRP54-201ENST00000216774 TTC9BQ8N6N2 239 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms