RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Ech1O35459 327 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 LcatP16301 438 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ripk2P58801 539 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slc10a2P70172 348 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Sox4Q06831 440 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 StimateQ3UF25 288 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pnliprp1Q5BKQ4 473 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Trav8d-2Q5R1B6 112 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Utp14bQ6EJB6 756 aaKnown RBP14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Spata24Q6P926 205 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tmem270Q6UJB9 264 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ints7Q7TQK1 966 aaKnown RBP14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cnot10Q8BH15 744 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Elmo2Q8BHL5 732 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Trmt2bQ8BQJ6 493 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gpr26Q8BZA7 337 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Tmem198bQ8CFU0 350 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cplx3Q8R1B5 158 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr695Q8VFM3 315 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slc44a3Q921V7 656 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Dhrs7bQ99J47 323 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slco6d1Q9D5W6 683 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Mrpl17Q9D8P4 176 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Znf654Q9DAU9 571 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ccdc97Q9DBT3 340 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pkmyt1Q9ESG9 490 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ccr10Q9JL21 362 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Hey2Q9QUS4 339 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Actl7aQ9QY84 440 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 EcsitQ9QZH6 435 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Crybg1A0A0G2JG52 2065 aa14.55□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Plxnd1Q3UH93 1925 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Unc80Q8BLN6 3261 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Igkv17-127A0A0G2JDN5 117 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr566A0A1B0GST0 319 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Serpinb3cA2RSF9 386 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gm20403G3UYB0 123 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Slc9a3G3X939 829 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Eef1bO70251 225 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Srpk1O70551 648 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Il1aP01582 270 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Igkv7-33P01632 114 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 P01740 135 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 UmpsP13439 481 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 H2-Q8P14430 326 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Fgf14P70379 247 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 QrfprP83861 433 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Mat2aQ3THS6 395 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 D17Wsu92eQ3TT38 291 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Uap1l1Q3TW96 507 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gpr174Q3U507 335 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Trafd1Q3UDK1 580 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cnga4Q3UW12 575 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cpa6Q5U901 438 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 ManealQ6P1J0 452 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Znf513Q6PD29 541 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr845Q7TRG2 312 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Acat3Q80X81 397 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ppm1nQ8BGL1 404 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pggt1bQ8BUY9 377 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Clptm1lQ8BXA5 539 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 PigtQ8BXQ2 582 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 PygbQ8CI94 843 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Scara5Q8K299 491 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Cops8Q8VBV7 209 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Adgre4Q91ZE5 689 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 ArhgdiaQ99PT1 204 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ssu72Q9CY97 194 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Trpv4Q9EPK8 871 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Kcne5Q9QZ26 143 aa14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Rfwd2Q9R1A8 733 aaKnown RBP14.54□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Oas1eA0A0J9YV76 386 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Nt5c1aA3KFX0 365 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Gm382B1AXN3 1250 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 E9Q0B3 247 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Vmn2r104E9Q2J5 860 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ebf2O08792 575 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Casq2O09161 415 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Top3aO70157 1003 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 P01669 111 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 H2-Eb1P04230 264 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Atp1b2P14231 290 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pdcd2P46718 343 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Rpl36P47964 105 aaKnown RBP14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Rab10P61027 200 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Fbp2P70695 339 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ppp1r7Q3UM45 361 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 4930438A08RikQ5SPH3 536 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr299Q7TS05 330 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ccdc68Q8BVC4 333 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Npsr1Q8BZP8 371 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Ppp4r4Q8C0Y0 875 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Apbb3Q8R1C9 486 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Olfr606Q8VGZ8 319 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pcdhga9Q91XX9 932 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Pih1d1Q9CQJ2 290 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Nt5c3aQ9D020 331 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Creb3l4Q9D2A5 370 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 Akr1c12Q9JLI0 323 aa14.53□□□□□ -0.08
Ercc1-201ENSMUST00000003645 UxtQ9WTZ0 157 aa14.53□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms