RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 ALD4P46367 519 aaKnown RBP1.33□□□□□ -2.2
snR47snR47 YLR257WQ06146 321 aaKnown RBP1.33□□□□□ -2.2
snR47snR47 TY1A-LR4P0C2I8 440 aaKnown RBP1.32□□□□□ -2.2
snR47snR47 TY1A-DR6P0CX70 440 aa1.32□□□□□ -2.2
snR47snR47 TY1A-ER1P0CX71 440 aa1.32□□□□□ -2.2
snR47snR47 TY1A-LR2P0CX72 440 aa1.32□□□□□ -2.2
snR47snR47 TY1A-PLP0CX73 440 aa1.32□□□□□ -2.2
snR47snR47 TY1A-JR1P0CX74 440 aa1.32□□□□□ -2.2
snR47snR47 TY1A-LR3P0CX75 440 aa1.32□□□□□ -2.2
snR47snR47 TY1A-ML2P0CX76 440 aa1.32□□□□□ -2.2
snR47snR47 SRM1P21827 482 aa1.32□□□□□ -2.2
snR47snR47 RET1P22276 1149 aaKnown RBP1.32□□□□□ -2.2
snR47snR47 HRR25P29295 494 aaKnown RBP1.32□□□□□ -2.2
snR47snR47 SEC26P41810 973 aaKnown RBP1.32□□□□□ -2.2
snR47snR47 GLO1P50107 326 aa1.32□□□□□ -2.2
snR47snR47 YAP6Q03935 383 aa1.32□□□□□ -2.2
snR47snR47 NBA1Q08229 501 aaKnown RBP1.32□□□□□ -2.2
snR47snR47 MCH5Q08777 521 aa1.32□□□□□ -2.2
snR47snR47 TY1A-GR1Q12085 440 aa1.32□□□□□ -2.2
snR47snR47 TY1A-PR3Q6Q5H1 440 aaKnown RBP1.32□□□□□ -2.2
snR47snR47 TY1A-OLQ92392 440 aaKnown RBP1.32□□□□□ -2.2
snR47snR47 GAL10P04397 699 aa1.31□□□□□ -2.2
snR47snR47 MCM5P29496 775 aaKnown RBP1.31□□□□□ -2.2
snR47snR47 DUR3P33413 735 aa1.31□□□□□ -2.2
snR47snR47 IMO32P53219 342 aa1.31□□□□□ -2.2
snR47snR47 PBP1P53297 722 aaKnown RBP1.31□□□□□ -2.2
snR47snR47 UBP3Q01477 912 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
snR47snR47 HRK1Q08732 759 aaKnown RBP1.31□□□□□ -2.2
snR47snR47 HMI1Q12039 706 aa1.31□□□□□ -2.2
snR47snR47 RTG2P32608 588 aaKnown RBP1.3□□□□□ -2.2
snR47snR47 SIS2P36024 562 aa1.3□□□□□ -2.2
snR47snR47 NMD3P38861 518 aaKnown RBP1.3□□□□□ -2.2
snR47snR47 SAP155P43612 1002 aa1.3□□□□□ -2.2
snR47snR47 STB2P46679 850 aa1.3□□□□□ -2.2
snR47snR47 YJL007CP47080 104 aa1.3□□□□□ -2.2
snR47snR47 NOP12Q08208 459 aaKnown RBP1.3□□□□□ -2.2
snR47snR47 AIM39Q08223 395 aa1.3□□□□□ -2.2
snR47snR47 YNL162W-AQ3E7A8 72 aa1.3□□□□□ -2.2
snR47snR47 TIF1P10081 395 aaKnown RBP1.29□□□□□ -2.2
snR47snR47 YSC84P32793 468 aa1.29□□□□□ -2.2
snR47snR47 PEX2P32800 271 aa1.29□□□□□ -2.2
snR47snR47 SMC1P32908 1225 aa1.29□□□□□ -2.2
snR47snR47 MTH1P35198 433 aa1.29□□□□□ -2.2
snR47snR47 YAR028WP39548 234 aa1.29□□□□□ -2.2
snR47snR47 SIP5P40210 489 aaKnown RBP1.29□□□□□ -2.2
snR47snR47 RSA3Q05942 220 aaKnown RBP1.29□□□□□ -2.2
snR47snR47 OMS1Q06668 471 aa1.29□□□□□ -2.2
snR47snR47 EMC1P25574 760 aa1.28□□□□□ -2.2
snR47snR47 BAP2P38084 609 aa1.28□□□□□ -2.2
snR47snR47 YJL045WP47052 634 aa1.28□□□□□ -2.2
snR47snR47 STB4P50104 949 aa1.28□□□□□ -2.2
snR47snR47 EXG2P52911 562 aa1.28□□□□□ -2.2
snR47snR47 RCL1Q08096 367 aaPredicted RBP1.28□□□□□ -2.2
snR47snR47 BNR1P40450 1375 aa1.27□□□□□ -2.21
snR47snR47 SLX1P38324 304 aa1.27□□□□□ -2.21
snR47snR47 SUT1P53032 299 aaKnown RBP1.27□□□□□ -2.21
snR47snR47 YOL073CQ08232 322 aa1.27□□□□□ -2.21
snR47snR47 MSL5Q12186 476 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
snR47snR47 RIB2Q12362 591 aaKnown RBP1.27□□□□□ -2.21
snR47snR47 CMP2P14747 604 aa1.26□□□□□ -2.21
snR47snR47 PFK1P16861 987 aaKnown RBP1.26□□□□□ -2.21
snR47snR47 RPB10P22139 70 aa1.26□□□□□ -2.21
snR47snR47 EXO5P38289 585 aa1.26□□□□□ -2.21
snR47snR47 LEO1P38439 464 aa1.26□□□□□ -2.21
snR47snR47 NEM1P38757 446 aa1.26□□□□□ -2.21
snR47snR47 PLB1P39105 664 aa1.26□□□□□ -2.21
snR47snR47 ATG32P40458 529 aa1.26□□□□□ -2.21
snR47snR47 SLS1P42900 643 aa1.26□□□□□ -2.21
snR47snR47 YLR040CQ07988 224 aa1.26□□□□□ -2.21
snR47snR47 HSE1P38753 452 aa1.25□□□□□ -2.21
snR47snR47 BIM1P40013 344 aa1.25□□□□□ -2.21
snR47snR47 BUL1P48524 976 aa1.25□□□□□ -2.21
snR47snR47 GND2P53319 492 aa1.25□□□□□ -2.21
snR47snR47 RSM24Q03976 319 aa1.25□□□□□ -2.21
snR47snR47 SIZ1Q04195 904 aa1.25□□□□□ -2.21
snR47snR47 PUF6Q04373 656 aaKnown RBP1.25□□□□□ -2.21
snR47snR47 NOB1Q08444 459 aaKnown RBP1.25□□□□□ -2.21
snR47snR47 ACF2Q12168 779 aa1.25□□□□□ -2.21
snR47snR47 SPO21Q12411 609 aa1.25□□□□□ -2.21
snR47snR47 COQ4O13525 335 aa1.24□□□□□ -2.21
snR47snR47 STE4P18851 423 aa1.24□□□□□ -2.21
snR47snR47 EFT1P32324 842 aaKnown RBP1.24□□□□□ -2.21
snR47snR47 SPC42P36094 363 aa1.24□□□□□ -2.21
snR47snR47 TGL4P36165 910 aa1.24□□□□□ -2.21
snR47snR47 CCZ1P38273 704 aa1.24□□□□□ -2.21
snR47snR47 QNS1P38795 714 aaKnown RBP1.24□□□□□ -2.21
snR47snR47 PIK1P39104 1066 aa1.24□□□□□ -2.21
snR47snR47 YAF9P53930 226 aa1.24□□□□□ -2.21
snR47snR47 TIM44Q01852 431 aa1.24□□□□□ -2.21
snR47snR47 SUT2Q12286 268 aa1.24□□□□□ -2.21
snR47snR47 TUB1P09733 447 aaKnown RBP1.23□□□□□ -2.21
snR47snR47 NOP1P15646 327 aaKnown RBP1.23□□□□□ -2.21
snR47snR47 SNF5P18480 905 aa1.23□□□□□ -2.21
snR47snR47 ILV6P25605 309 aaKnown RBP1.23□□□□□ -2.21
snR47snR47 FLO10P36170 1169 aa1.23□□□□□ -2.21
snR47snR47 BPL1P48445 690 aaPredicted RBP1.23□□□□□ -2.21
snR47snR47 PUN1Q06991 263 aa1.23□□□□□ -2.21
snR47snR47 LAS17Q12446 633 aa1.23□□□□□ -2.21
snR47snR47 UBX7P38349 436 aa1.22□□□□□ -2.21
snR47snR47 RIX1P38883 763 aaPredicted RBP1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms