RNA–Protein interactions for RNA: YNR060W

FRE4, Transcript of Ferric reductase, yeast

Gene FRE4, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE4	YNR060W	MSC7	P38694	644 aa		4.25	□□□□□ -1.73
FRE4	YNR060W	YGL140C	P53120	1219 aa		4.25	□□□□□ -1.73
FRE4	YNR060W	ERP6	P53198	216 aa		4.25	□□□□□ -1.73
FRE4	YNR060W	UGO1	Q03327	502 aa		4.25	□□□□□ -1.73
FRE4	YNR060W	EAF1	Q06337	982 aa		4.25	□□□□□ -1.73
FRE4	YNR060W	PIF1	P07271	859 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	TRX2	P22803	104 aa	Known RBP	4.24	□□□□□ -1.73
FRE4	YNR060W	SBA1	P28707	216 aa	Known RBP	4.24	□□□□□ -1.73
FRE4	YNR060W	MRP8	P35719	219 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	IES5	P40060	125 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	YIL165C	P40446	119 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	UBP2	Q01476	1272 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	TFB2	Q02939	513 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	CEF1	Q03654	590 aa	Predicted RBP	4.24	□□□□□ -1.73
FRE4	YNR060W	SLX4	Q12098	748 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	PYC2	P32327	1180 aa	Known RBP	4.24	□□□□□ -1.73
FRE4	YNR060W	MKK2	P32491	506 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	RDH54	P38086	958 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	AMN1	P38285	549 aa	Predicted RBP	4.24	□□□□□ -1.73
FRE4	YNR060W	RGA1	P39083	1007 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	SNF7	P39929	240 aa	Known RBP	4.24	□□□□□ -1.73
FRE4	YNR060W	YTA6	P40328	754 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	YGR237C	P50089	785 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	MDG1	P53885	366 aa		4.24	□□□□□ -1.73
FRE4	YNR060W	NOG1	Q02892	647 aa	Known RBP	4.24	□□□□□ -1.73
FRE4	YNR060W	MRPL16	P38064	232 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	PBY1	P38254	753 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	RIM11	P38615	370 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	YLR225C	Q05948	407 aa	Known RBP	4.23	□□□□□ -1.73
FRE4	YNR060W	BRE1	Q07457	700 aa	Known RBP	4.23	□□□□□ -1.73
FRE4	YNR060W	YLR001C	Q07895	862 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	REC8	Q12188	680 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	NKP1	Q12493	238 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	PRP5	P21372	849 aa	Predicted RBP	4.23	□□□□□ -1.73
FRE4	YNR060W	LYP1	P32487	611 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	APM2	P38700	605 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	PEX28	P38848	579 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	AIM46	P38885	310 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	GDH3	P39708	457 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	SIW14	P53965	281 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	YDR444W	Q04093	687 aa		4.23	□□□□□ -1.73
FRE4	YNR060W	LCB5	Q06147	687 aa	Known RBP	4.23	□□□□□ -1.73
FRE4	YNR060W	TAF13	P11747	167 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	MEF1	P25039	761 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	ARE1	P25628	610 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	YER156C	P40093	338 aa	Known RBP	4.22	□□□□□ -1.73
FRE4	YNR060W	HSV2	P50079	448 aa	Predicted RBP	4.22	□□□□□ -1.73
FRE4	YNR060W	YNL193W	P53870	558 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	COG6	P53959	839 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	SND1	Q04007	877 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	SPO20	Q04359	397 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	TMA64	Q04600	565 aa	Known RBP	4.22	□□□□□ -1.73
FRE4	YNR060W	YLR346C	Q06139	101 aa		4.22	□□□□□ -1.73
FRE4	YNR060W	CMR1	Q12510	522 aa	Known RBP	4.22	□□□□□ -1.73
FRE4	YNR060W	IDI1	P15496	288 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	NPR1	P22211	790 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	SFP1	P32432	683 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	PEX6	P33760	1030 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	HUL4	P40985	892 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	YGR021W	P53212	290 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	TY1A-MR1	Q04215	440 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	YPL066W	Q12194	479 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	MDM12	Q92328	271 aa		4.21	□□□□□ -1.73
FRE4	YNR060W	ATP4	P05626	244 aa		4.21	□□□□□ -1.74
FRE4	YNR060W	ROG3	P43602	733 aa		4.21	□□□□□ -1.74
FRE4	YNR060W	PMT3	P47190	753 aa		4.21	□□□□□ -1.74
FRE4	YNR060W	PMT7	Q06644	662 aa		4.21	□□□□□ -1.74
FRE4	YNR060W	THI73	Q07904	523 aa		4.21	□□□□□ -1.74
FRE4	YNR060W	TMA7	Q3E764	64 aa	Known RBP	4.21	□□□□□ -1.74
FRE4	YNR060W	HVG1	P0CE11	249 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	HBS1	P32769	611 aa	Known RBP	4.2	□□□□□ -1.74
FRE4	YNR060W	ACO2	P39533	789 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	SEC26	P41810	973 aa	Known RBP	4.2	□□□□□ -1.74
FRE4	YNR060W	MTR4	P47047	1073 aa	Known RBP	4.2	□□□□□ -1.74
FRE4	YNR060W	SCW11	P53189	542 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	CUZ1	P53899	274 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
FRE4	YNR060W	UME1	Q03010	460 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	MRP10	O75012	95 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	DIT1	P21623	536 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	MSH3	P25336	1018 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	HIR1	P32479	840 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	YBR071W	P38243	211 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	NIT1	P40447	199 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	ALR2	P43553	858 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	RSM26	P47141	266 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	HLJ1	P48353	224 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	ATG16	Q03818	150 aa		4.2	□□□□□ -1.74
FRE4	YNR060W	TOP3	P13099	656 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	EUG1	P32474	517 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	YBR287W	P38355	427 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	ERP2	P39704	215 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	ENT3	P47160	408 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	ALO1	P54783	526 aa	Known RBP	4.19	□□□□□ -1.74
FRE4	YNR060W	ROD1	Q02805	837 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	TIF35	Q04067	274 aa	Known RBP	4.19	□□□□□ -1.74
FRE4	YNR060W	YDL176W	Q12027	708 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	HBN1	Q96VH4	193 aa		4.19	□□□□□ -1.74
FRE4	YNR060W	MOT2	P34909	587 aa	Known RBP	4.19	□□□□□ -1.74
FRE4	YNR060W	SQT1	P35184	431 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 38.2 ms