RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W COG6P53959 839 aa8.46□□□□□ -1.06
HDA1YNL021W OSH2Q12451 1283 aa8.46□□□□□ -1.06
HDA1YNL021W TMA7Q3E764 64 aaKnown RBP8.46□□□□□ -1.06
HDA1YNL021W MSN1P22148 382 aa8.45□□□□□ -1.06
HDA1YNL021W NPR1P22211 790 aa8.45□□□□□ -1.06
HDA1YNL021W AGP1P25376 633 aa8.45□□□□□ -1.06
HDA1YNL021W GPP1P41277 250 aaKnown RBP8.45□□□□□ -1.06
HDA1YNL021W MTC5Q03897 1148 aa8.45□□□□□ -1.06
HDA1YNL021W BNI1P41832 1953 aa8.45□□□□□ -1.06
HDA1YNL021W PSY2P40164 858 aa8.44□□□□□ -1.06
HDA1YNL021W YFR016CP43597 1233 aaKnown RBP8.44□□□□□ -1.06
HDA1YNL021W DAS1P47005 663 aa8.44□□□□□ -1.06
HDA1YNL021W APP1P53933 587 aa8.44□□□□□ -1.06
HDA1YNL021W UGO1Q03327 502 aa8.44□□□□□ -1.06
HDA1YNL021W CHC1P22137 1653 aaKnown RBP8.44□□□□□ -1.06
HDA1YNL021W MKK2P32491 506 aa8.44□□□□□ -1.06
HDA1YNL021W VBA5P36172 582 aa8.44□□□□□ -1.06
HDA1YNL021W VID27P40157 782 aa8.44□□□□□ -1.06
HDA1YNL021W SHE9Q04172 456 aa8.44□□□□□ -1.06
HDA1YNL021W SBP1P10080 294 aaKnown RBP8.43□□□□□ -1.06
HDA1YNL021W MCM1P11746 286 aa8.43□□□□□ -1.06
HDA1YNL021W ABD1P32783 436 aaPredicted RBP8.43□□□□□ -1.06
HDA1YNL021W SCD5P34758 872 aa8.43□□□□□ -1.06
HDA1YNL021W HXT13P39924 564 aa8.43□□□□□ -1.06
HDA1YNL021W IRR1P40541 1150 aa8.43□□□□□ -1.06
HDA1YNL021W KRI1P42846 591 aaKnown RBP8.43□□□□□ -1.06
HDA1YNL021W HXT17P53631 564 aa8.43□□□□□ -1.06
HDA1YNL021W YNL165WP53891 406 aa8.43□□□□□ -1.06
HDA1YNL021W HXT15P54854 567 aa8.43□□□□□ -1.06
HDA1YNL021W ENT2Q05785 613 aa8.43□□□□□ -1.06
HDA1YNL021W SFP1P32432 683 aa8.42□□□□□ -1.06
HDA1YNL021W IRS4P36115 615 aaKnown RBP8.42□□□□□ -1.06
HDA1YNL021W KRE33P53914 1056 aaKnown RBP8.42□□□□□ -1.06
HDA1YNL021W YNL034WP53963 612 aa8.42□□□□□ -1.06
HDA1YNL021W YNL018CP53976 612 aa8.42□□□□□ -1.06
HDA1YNL021W ALO1P54783 526 aaKnown RBP8.42□□□□□ -1.06
HDA1YNL021W EAF1Q06337 982 aa8.42□□□□□ -1.06
HDA1YNL021W THI73Q07904 523 aa8.42□□□□□ -1.06
HDA1YNL021W WSC3Q12215 556 aa8.42□□□□□ -1.06
HDA1YNL021W HEM13P11353 328 aaKnown RBP8.42□□□□□ -1.06
HDA1YNL021W MEF1P25039 761 aa8.42□□□□□ -1.06
HDA1YNL021W YDR344CQ05510 147 aa8.42□□□□□ -1.06
HDA1YNL021W HLJ1P48353 224 aa8.41□□□□□ -1.06
HDA1YNL021W UTP8P53276 713 aaKnown RBP8.41□□□□□ -1.06
HDA1YNL021W YNL193WP53870 558 aa8.41□□□□□ -1.06
HDA1YNL021W YLR001CQ07895 862 aa8.41□□□□□ -1.06
HDA1YNL021W YPR015CQ12531 247 aa8.41□□□□□ -1.06
HDA1YNL021W TRP2P00899 507 aaKnown RBP8.41□□□□□ -1.06
HDA1YNL021W RPN12P32496 274 aa8.41□□□□□ -1.06
HDA1YNL021W FBP26P32604 452 aa8.41□□□□□ -1.06
HDA1YNL021W YKL222CP35995 705 aa8.41□□□□□ -1.06
HDA1YNL021W YBR071WP38243 211 aa8.41□□□□□ -1.06
HDA1YNL021W MRL1Q06815 381 aa8.41□□□□□ -1.06
HDA1YNL021W MPD2Q99316 277 aa8.41□□□□□ -1.06
HDA1YNL021W AMN1P38285 549 aaPredicted RBP8.4□□□□□ -1.06
HDA1YNL021W RPT2P40327 437 aaKnown RBP8.4□□□□□ -1.06
HDA1YNL021W HOS4P40480 1083 aa8.4□□□□□ -1.06
HDA1YNL021W XKS1P42826 600 aa8.4□□□□□ -1.06
HDA1YNL021W HSV2P50079 448 aaPredicted RBP8.4□□□□□ -1.06
HDA1YNL021W ERP6P53198 216 aa8.4□□□□□ -1.06
HDA1YNL021W VMS1Q04311 632 aaKnown RBP8.4□□□□□ -1.06
HDA1YNL021W YOR093CQ12275 1648 aa8.4□□□□□ -1.06
HDA1YNL021W MPH2P0CD99 609 aa8.39□□□□□ -1.07
HDA1YNL021W DPB3P27344 201 aa8.39□□□□□ -1.07
HDA1YNL021W PEX6P33760 1030 aa8.39□□□□□ -1.07
HDA1YNL021W PMT3P47190 753 aa8.39□□□□□ -1.07
HDA1YNL021W MON1P53129 644 aa8.39□□□□□ -1.07
HDA1YNL021W UME1Q03010 460 aa8.39□□□□□ -1.07
HDA1YNL021W ARE1P25628 610 aa8.39□□□□□ -1.07
HDA1YNL021W EUG1P32474 517 aa8.39□□□□□ -1.07
HDA1YNL021W NAB2P32505 525 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
HDA1YNL021W TOA1P32773 286 aa8.39□□□□□ -1.07
HDA1YNL021W LDH1P38139 375 aa8.39□□□□□ -1.07
HDA1YNL021W BDP1P46678 594 aa8.39□□□□□ -1.07
HDA1YNL021W TMA46Q12000 345 aaKnown RBP8.39□□□□□ -1.07
HDA1YNL021W GDH3P39708 457 aa8.38□□□□□ -1.07
HDA1YNL021W NUT1P53114 1132 aa8.38□□□□□ -1.07
HDA1YNL021W REC8Q12188 680 aa8.38□□□□□ -1.07
HDA1YNL021W WTM2Q12206 467 aa8.38□□□□□ -1.07
HDA1YNL021W NYV1Q12255 253 aa8.38□□□□□ -1.07
HDA1YNL021W KAR2P16474 682 aaKnown RBP8.38□□□□□ -1.07
HDA1YNL021W MFT1P33441 392 aaKnown RBP8.38□□□□□ -1.07
HDA1YNL021W MRP8P35719 219 aa8.38□□□□□ -1.07
HDA1YNL021W SEC26P41810 973 aaKnown RBP8.38□□□□□ -1.07
HDA1YNL021W PDR5P33302 1511 aaKnown RBP8.37□□□□□ -1.07
HDA1YNL021W SST2P11972 698 aaKnown RBP8.37□□□□□ -1.07
HDA1YNL021W MTC2P34246 357 aa8.37□□□□□ -1.07
HDA1YNL021W RER2P35196 286 aa8.37□□□□□ -1.07
HDA1YNL021W PEA2P40091 420 aa8.37□□□□□ -1.07
HDA1YNL021W HAP5Q02516 242 aa8.37□□□□□ -1.07
HDA1YNL021W YLR225CQ05948 407 aaKnown RBP8.37□□□□□ -1.07
HDA1YNL021W HDA2Q06629 674 aa8.37□□□□□ -1.07
HDA1YNL021W IOC2Q12072 812 aa8.37□□□□□ -1.07
HDA1YNL021W PGI1P12709 554 aaKnown RBP8.36□□□□□ -1.07
HDA1YNL021W DAT1P13483 248 aaKnown RBP8.36□□□□□ -1.07
HDA1YNL021W SBA1P28707 216 aaKnown RBP8.36□□□□□ -1.07
HDA1YNL021W PLC1P32383 869 aa8.36□□□□□ -1.07
HDA1YNL021W QDR2P40474 542 aa8.36□□□□□ -1.07
HDA1YNL021W ESF2P53743 316 aaKnown RBP8.36□□□□□ -1.07
HDA1YNL021W PRT1P06103 763 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms