RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A UBP3Q01477 912 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
YLR035C-AYLR035C-A YLR122CQ12312 125 aa2.41□□□□□ -2.02
YLR035C-AYLR035C-A RPS4AP0CX35 261 aaKnown RBP2.4□□□□□ -2.02
YLR035C-AYLR035C-A RPS4BP0CX36 261 aaKnown RBP2.4□□□□□ -2.02
YLR035C-AYLR035C-A VPS35P34110 944 aa2.4□□□□□ -2.02
YLR035C-AYLR035C-A YKR073CP36153 106 aa2.4□□□□□ -2.02
YLR035C-AYLR035C-A YAR028WP39548 234 aa2.4□□□□□ -2.02
YLR035C-AYLR035C-A DSE4P53753 1117 aa2.4□□□□□ -2.02
YLR035C-AYLR035C-A MTC5Q03897 1148 aa2.4□□□□□ -2.02
YLR035C-AYLR035C-A YLR257WQ06146 321 aaKnown RBP2.4□□□□□ -2.02
YLR035C-AYLR035C-A AOS1Q06624 347 aa2.4□□□□□ -2.02
YLR035C-AYLR035C-A SPO21Q12411 609 aa2.4□□□□□ -2.02
YLR035C-AYLR035C-A AI3P03877 415 aa2.4□□□□□ -2.03
YLR035C-AYLR035C-A PRO1P32264 428 aa2.4□□□□□ -2.03
YLR035C-AYLR035C-A PET112P33893 541 aa2.4□□□□□ -2.03
YLR035C-AYLR035C-A ETP1P38748 585 aaKnown RBP2.4□□□□□ -2.03
YLR035C-AYLR035C-A YJL045WP47052 634 aa2.4□□□□□ -2.03
YLR035C-AYLR035C-A GUP1P53154 560 aa2.4□□□□□ -2.03
YLR035C-AYLR035C-A PTC5Q12511 572 aa2.4□□□□□ -2.03
YLR035C-AYLR035C-A HDA2Q06629 674 aa2.4□□□□□ -2.03
YLR035C-AYLR035C-A ALG3P38179 458 aa2.39□□□□□ -2.03
YLR035C-AYLR035C-A YGL140CP53120 1219 aa2.39□□□□□ -2.03
YLR035C-AYLR035C-A ADI1Q03677 179 aa2.39□□□□□ -2.03
YLR035C-AYLR035C-A KAR2P16474 682 aaKnown RBP2.39□□□□□ -2.03
YLR035C-AYLR035C-A MTR4P47047 1073 aaKnown RBP2.39□□□□□ -2.03
YLR035C-AYLR035C-A FAL1Q12099 399 aaKnown RBP2.39□□□□□ -2.03
YLR035C-AYLR035C-A KAE1P36132 386 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A SKN7P38889 622 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A MXR1P40029 184 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A RCM1P53972 490 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A YPL109CQ02981 657 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A RRP15Q06511 250 aaPredicted RBP2.38□□□□□ -2.03
YLR035C-AYLR035C-A YKL069WP36088 180 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A POL12P38121 705 aaPredicted RBP2.38□□□□□ -2.03
YLR035C-AYLR035C-A MMM1P41800 426 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A MAP1Q01662 387 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YLR035C-AYLR035C-A CAB3P36076 571 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A MEC3Q02574 474 aa2.38□□□□□ -2.03
YLR035C-AYLR035C-A ARI1P53111 347 aaKnown RBP2.37□□□□□ -2.03
YLR035C-AYLR035C-A YGR122WP53272 402 aa2.37□□□□□ -2.03
YLR035C-AYLR035C-A SSY1Q03770 852 aa2.37□□□□□ -2.03
YLR035C-AYLR035C-A RGA2Q06407 1009 aa2.37□□□□□ -2.03
YLR035C-AYLR035C-A HVG1P0CE11 249 aa2.37□□□□□ -2.03
YLR035C-AYLR035C-A SEC23P15303 768 aaKnown RBP2.37□□□□□ -2.03
YLR035C-AYLR035C-A SAF1P38352 637 aa2.37□□□□□ -2.03
YLR035C-AYLR035C-A YRB30P53107 440 aaPredicted RBP2.37□□□□□ -2.03
YLR035C-AYLR035C-A MBP1P39678 833 aa2.37□□□□□ -2.03
YLR035C-AYLR035C-A KIP1P28742 1111 aa2.36□□□□□ -2.03
YLR035C-AYLR035C-A SCP160P06105 1222 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YLR035C-AYLR035C-A INO1P11986 533 aa2.36□□□□□ -2.03
YLR035C-AYLR035C-A YGL176CP46945 554 aa2.36□□□□□ -2.03
YLR035C-AYLR035C-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YLR035C-AYLR035C-A MSH6Q03834 1242 aa2.36□□□□□ -2.03
YLR035C-AYLR035C-A ERT1P38140 529 aa2.36□□□□□ -2.03
YLR035C-AYLR035C-A YIG1Q08956 461 aa2.36□□□□□ -2.03
YLR035C-AYLR035C-A ADD66P36040 267 aa2.35□□□□□ -2.03
YLR035C-AYLR035C-A SHU2P38957 223 aa2.35□□□□□ -2.03
YLR035C-AYLR035C-A NRD1P53617 575 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
YLR035C-AYLR035C-A ROT1Q03691 256 aa2.35□□□□□ -2.03
YLR035C-AYLR035C-A MKK2P32491 506 aa2.35□□□□□ -2.03
YLR035C-AYLR035C-A GCV2P49095 1034 aa2.35□□□□□ -2.03
YLR035C-AYLR035C-A RSB1Q08417 382 aa2.35□□□□□ -2.03
YLR035C-AYLR035C-A YVC1Q12324 675 aa2.35□□□□□ -2.03
YLR035C-AYLR035C-A YER152CP10356 443 aa2.34□□□□□ -2.03
YLR035C-AYLR035C-A AFG2P32794 780 aa2.34□□□□□ -2.03
YLR035C-AYLR035C-A YJR107WP47145 328 aa2.34□□□□□ -2.03
YLR035C-AYLR035C-A GTF1P53260 183 aaPredicted RBP2.34□□□□□ -2.03
YLR035C-AYLR035C-A ESF1Q06344 628 aaKnown RBP2.34□□□□□ -2.03
YLR035C-AYLR035C-A PUS7Q08647 676 aaKnown RBP2.34□□□□□ -2.03
YLR035C-AYLR035C-A SLP1Q12232 587 aa2.34□□□□□ -2.03
YLR035C-AYLR035C-A RAD27P26793 382 aa2.34□□□□□ -2.03
YLR035C-AYLR035C-A RER2P35196 286 aa2.34□□□□□ -2.03
YLR035C-AYLR035C-A SUB1P54000 292 aaKnown RBP2.34□□□□□ -2.03
YLR035C-AYLR035C-A TIF35Q04067 274 aaKnown RBP2.34□□□□□ -2.03
YLR035C-AYLR035C-A RSA3Q05942 220 aaKnown RBP2.34□□□□□ -2.03
YLR035C-AYLR035C-A RCL1Q08096 367 aaPredicted RBP2.34□□□□□ -2.03
YLR035C-AYLR035C-A YBR284WP38150 797 aa2.34□□□□□ -2.04
YLR035C-AYLR035C-A BRN1P38170 754 aa2.34□□□□□ -2.04
YLR035C-AYLR035C-A AVT1P47082 602 aa2.34□□□□□ -2.04
YLR035C-AYLR035C-A SPP382Q06411 708 aaPredicted RBP2.34□□□□□ -2.04
YLR035C-AYLR035C-A MCD1Q12158 566 aa2.34□□□□□ -2.04
YLR035C-AYLR035C-A TRP2P00899 507 aaKnown RBP2.33□□□□□ -2.04
YLR035C-AYLR035C-A SYP1P25623 870 aaKnown RBP2.33□□□□□ -2.04
YLR035C-AYLR035C-A LRG1P35688 1017 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A MNN4P36044 1178 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A QNS1P38795 714 aaKnown RBP2.33□□□□□ -2.04
YLR035C-AYLR035C-A GCV1P48015 400 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A MED7Q08278 222 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A TRE1Q08919 783 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A LAP2Q10740 671 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A HSP78P33416 811 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A SEG2P34250 1132 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A YHL012WP38709 493 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A MAG2Q06436 670 aaKnown RBP2.33□□□□□ -2.04
YLR035C-AYLR035C-A UBX5Q06682 500 aa2.33□□□□□ -2.04
YLR035C-AYLR035C-A PRP5P21372 849 aaPredicted RBP2.32□□□□□ -2.04
YLR035C-AYLR035C-A RNQ1P25367 405 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A SFA1P32771 386 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A HSE1P38753 452 aa2.32□□□□□ -2.04
YLR035C-AYLR035C-A LEM3P42838 414 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms