RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeastyeast

Gene LSB1, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB1YGR136W KAR2P16474 682 aaKnown RBP5.19□□□□□ -1.58
LSB1YGR136W SUV3P32580 737 aa5.19□□□□□ -1.58
LSB1YGR136W PRP40P33203 583 aaKnown RBP5.19□□□□□ -1.58
LSB1YGR136W PGM1P33401 570 aaKnown RBP5.19□□□□□ -1.58
LSB1YGR136W UFD2P54860 961 aa5.19□□□□□ -1.58
LSB1YGR136W MEC3Q02574 474 aa5.19□□□□□ -1.58
LSB1YGR136W NPR2P39923 615 aa5.18□□□□□ -1.58
LSB1YGR136W PRK1P40494 810 aa5.18□□□□□ -1.58
LSB1YGR136W YJR107WP47145 328 aa5.18□□□□□ -1.58
LSB1YGR136W LYS4P49367 693 aaPredicted RBP5.18□□□□□ -1.58
LSB1YGR136W PAP2P53632 584 aaKnown RBP5.18□□□□□ -1.58
LSB1YGR136W TRS120Q04183 1289 aa5.18□□□□□ -1.58
LSB1YGR136W APC11Q12157 165 aa5.18□□□□□ -1.58
LSB1YGR136W WHI5Q12416 295 aa5.18□□□□□ -1.58
LSB1YGR136W YIL177CP40434 1758 aa5.17□□□□□ -1.58
LSB1YGR136W YJL225CP40889 1758 aa5.17□□□□□ -1.58
LSB1YGR136W FKS3Q04952 1785 aa5.17□□□□□ -1.58
LSB1YGR136W UGA2P38067 497 aa5.17□□□□□ -1.58
LSB1YGR136W VPS27P40343 622 aaKnown RBP5.17□□□□□ -1.58
LSB1YGR136W AVT1P47082 602 aa5.17□□□□□ -1.58
LSB1YGR136W CDC45Q08032 650 aa5.17□□□□□ -1.58
LSB1YGR136W YRF1-4O13559 1382 aa5.16□□□□□ -1.58
LSB1YGR136W ATE1P16639 503 aa5.16□□□□□ -1.58
LSB1YGR136W SAC7P17121 654 aa5.16□□□□□ -1.58
LSB1YGR136W NAR1P23503 491 aaKnown RBP5.16□□□□□ -1.58
LSB1YGR136W SCD5P34758 872 aa5.16□□□□□ -1.58
LSB1YGR136W YKR075CP36155 307 aa5.16□□□□□ -1.58
LSB1YGR136W YBR197CP38306 217 aa5.16□□□□□ -1.58
LSB1YGR136W YRB30P53107 440 aaPredicted RBP5.16□□□□□ -1.58
LSB1YGR136W RMD1Q03441 430 aa5.16□□□□□ -1.58
LSB1YGR136W GIS4Q04233 774 aa5.16□□□□□ -1.58
LSB1YGR136W ATG13Q06628 738 aa5.16□□□□□ -1.58
LSB1YGR136W AUS1Q08409 1394 aa5.16□□□□□ -1.58
LSB1YGR136W MLF3P32047 452 aa5.15□□□□□ -1.59
LSB1YGR136W GCD6P32501 712 aaKnown RBP5.15□□□□□ -1.59
LSB1YGR136W ARI1P53111 347 aaKnown RBP5.15□□□□□ -1.59
LSB1YGR136W ADE16P54113 591 aaKnown RBP5.15□□□□□ -1.59
LSB1YGR136W YDL144CQ07589 356 aa5.15□□□□□ -1.59
LSB1YGR136W FRT1Q99332 602 aa5.15□□□□□ -1.59
LSB1YGR136W APC1P53886 1748 aa5.14□□□□□ -1.59
LSB1YGR136W MET4P32389 672 aa5.14□□□□□ -1.59
LSB1YGR136W ISC10P32645 267 aa5.14□□□□□ -1.59
LSB1YGR136W UTP4Q06679 776 aaKnown RBP5.14□□□□□ -1.59
LSB1YGR136W Q0182Q9ZZW1 134 aa5.14□□□□□ -1.59
LSB1YGR136W RPO41P13433 1351 aaKnown RBP5.14□□□□□ -1.59
LSB1YGR136W EDE1P34216 1381 aa5.14□□□□□ -1.59
LSB1YGR136W OSM1P21375 501 aaKnown RBP5.13□□□□□ -1.59
LSB1YGR136W HSP104P31539 908 aaKnown RBP5.13□□□□□ -1.59
LSB1YGR136W SFA1P32771 386 aa5.13□□□□□ -1.59
LSB1YGR136W SEC8P32855 1065 aa5.13□□□□□ -1.59
LSB1YGR136W SMC1P32908 1225 aa5.13□□□□□ -1.59
LSB1YGR136W RTR1P40084 226 aaPredicted RBP5.13□□□□□ -1.59
LSB1YGR136W DSD1P53095 428 aa5.13□□□□□ -1.59
LSB1YGR136W GAS5Q08193 484 aa5.13□□□□□ -1.59
LSB1YGR136W MED7Q08278 222 aa5.13□□□□□ -1.59
LSB1YGR136W VPS35P34110 944 aa5.12□□□□□ -1.59
LSB1YGR136W BOI1P38041 980 aaKnown RBP5.12□□□□□ -1.59
LSB1YGR136W HXT5P38695 592 aa5.12□□□□□ -1.59
LSB1YGR136W RRM3P38766 723 aa5.12□□□□□ -1.59
LSB1YGR136W NNF1P47149 201 aa5.12□□□□□ -1.59
LSB1YGR136W SKP1P52286 194 aa5.12□□□□□ -1.59
LSB1YGR136W OYE2Q03558 400 aaKnown RBP5.12□□□□□ -1.59
LSB1YGR136W SIR4P11978 1358 aa5.12□□□□□ -1.59
LSB1YGR136W PHO4P07270 312 aaKnown RBP5.11□□□□□ -1.59
LSB1YGR136W MRPL33P20084 86 aa5.11□□□□□ -1.59
LSB1YGR136W NAB2P32505 525 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
LSB1YGR136W AKL1P38080 1108 aaKnown RBP5.11□□□□□ -1.59
LSB1YGR136W NCL1P38205 684 aaKnown RBP5.11□□□□□ -1.59
LSB1YGR136W MPP10P47083 593 aaKnown RBP5.11□□□□□ -1.59
LSB1YGR136W CTH1P47976 325 aa5.11□□□□□ -1.59
LSB1YGR136W TCB2P48231 1178 aa5.11□□□□□ -1.59
LSB1YGR136W SAM37P50110 327 aa5.11□□□□□ -1.59
LSB1YGR136W YBP2P53169 641 aa5.11□□□□□ -1.59
LSB1YGR136W RRP46P53256 223 aaPredicted RBP5.11□□□□□ -1.59
LSB1YGR136W CDC55Q00362 526 aa5.11□□□□□ -1.59
LSB1YGR136W CTF4Q01454 927 aa5.11□□□□□ -1.59
LSB1YGR136W INP54Q08227 384 aaKnown RBP5.11□□□□□ -1.59
LSB1YGR136W TRP3P00937 484 aa5.1□□□□□ -1.59
LSB1YGR136W GRX1P25373 110 aaKnown RBP5.1□□□□□ -1.59
LSB1YGR136W COQ2P32378 372 aa5.1□□□□□ -1.59
LSB1YGR136W KAE1P36132 386 aa5.1□□□□□ -1.59
LSB1YGR136W YKR073CP36153 106 aa5.1□□□□□ -1.59
LSB1YGR136W YBR287WP38355 427 aa5.1□□□□□ -1.59
LSB1YGR136W OCA5P38738 679 aa5.1□□□□□ -1.59
LSB1YGR136W ALD3P54114 506 aa5.1□□□□□ -1.59
LSB1YGR136W FPR4Q06205 392 aaPredicted RBP5.1□□□□□ -1.59
LSB1YGR136W AOS1Q06624 347 aa5.1□□□□□ -1.59
LSB1YGR136W RVB2Q12464 471 aaKnown RBP5.1□□□□□ -1.59
LSB1YGR136W SUI2P20459 304 aaKnown RBP5.09□□□□□ -1.59
LSB1YGR136W PRD1P25375 712 aa5.09□□□□□ -1.59
LSB1YGR136W CIC1P38779 376 aaKnown RBP5.09□□□□□ -1.59
LSB1YGR136W MTO1P53070 669 aa5.09□□□□□ -1.59
LSB1YGR136W YNL011CP53980 444 aa5.09□□□□□ -1.59
LSB1YGR136W MNL2Q12205 849 aa5.09□□□□□ -1.59
LSB1YGR136W RSC4Q02206 625 aa5.08□□□□□ -1.6
LSB1YGR136W OXR1Q08952 273 aa5.08□□□□□ -1.6
LSB1YGR136W BUG1Q12191 341 aa5.08□□□□□ -1.6
LSB1YGR136W NUP145P49687 1317 aa5.07□□□□□ -1.6
LSB1YGR136W CLN2P20438 545 aa5.07□□□□□ -1.6
LSB1YGR136W RPB10P22139 70 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms