RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	NSG2	P53898	299 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	EAF1	Q06337	982 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	REC8	Q12188	680 aa		3.65	□□□□□ -1.83
TFB1	YDR311W	SBP1	P10080	294 aa	Known RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	MSH3	P25336	1018 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	ARE1	P25628	610 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	PMC1	P38929	1173 aa	Predicted RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	RTA1	P53047	317 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	YNR040W	P53736	256 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	SHE9	Q04172	456 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	NTG2	Q08214	380 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	CMR1	Q12510	522 aa	Known RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	SEC23	P15303	768 aa	Known RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	PDC5	P16467	563 aa	Known RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	GAL11	P19659	1081 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	RAD27	P26793	382 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	MOT2	P34909	587 aa	Known RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	BET3	P36149	193 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	RIM11	P38615	370 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	GGA2	P38817	585 aa	Known RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	TAF8	Q03750	510 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	PMT7	Q06644	662 aa		3.64	□□□□□ -1.83
TFB1	YDR311W	BUD21	Q08492	214 aa	Predicted RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	PUS1	Q12211	544 aa	Known RBP	3.64	□□□□□ -1.83
TFB1	YDR311W	NPR1	P22211	790 aa		3.63	□□□□□ -1.83
TFB1	YDR311W	MSH2	P25847	964 aa		3.63	□□□□□ -1.83
TFB1	YDR311W	KNS1	P32350	737 aa	Predicted RBP	3.63	□□□□□ -1.83
TFB1	YDR311W	GRX7	P38068	203 aa		3.63	□□□□□ -1.83
TFB1	YDR311W	ENP1	P38333	483 aa	Known RBP	3.63	□□□□□ -1.83
TFB1	YDR311W	APM2	P38700	605 aa		3.63	□□□□□ -1.83
TFB1	YDR311W	ERP6	P53198	216 aa		3.63	□□□□□ -1.83
TFB1	YDR311W	SUB1	P54000	292 aa	Known RBP	3.63	□□□□□ -1.83
TFB1	YDR311W	NOG1	Q02892	647 aa	Known RBP	3.63	□□□□□ -1.83
TFB1	YDR311W	MRP8	P35719	219 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	SIW14	P53965	281 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	ROD1	Q02805	837 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	SPO20	Q04359	397 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	RPP1A	P05318	106 aa	Predicted RBP	3.62	□□□□□ -1.83
TFB1	YDR311W	PRP5	P21372	849 aa	Predicted RBP	3.62	□□□□□ -1.83
TFB1	YDR311W	SBA1	P28707	216 aa	Known RBP	3.62	□□□□□ -1.83
TFB1	YDR311W	LYP1	P32487	611 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	RDH54	P38086	958 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	HUL4	P40985	892 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	MAL11	P53048	616 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	HEH2	Q03281	663 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	TDA6	Q06466	467 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	ATG13	Q06628	738 aa		3.62	□□□□□ -1.83
TFB1	YDR311W	PBY1	P38254	753 aa		3.61	□□□□□ -1.83
TFB1	YDR311W	MCX1	P38323	520 aa	Predicted RBP	3.61	□□□□□ -1.83
TFB1	YDR311W	MBP1	P39678	833 aa		3.61	□□□□□ -1.83
TFB1	YDR311W	ALR2	P43553	858 aa		3.61	□□□□□ -1.83
TFB1	YDR311W	LSB3	P43603	459 aa	Known RBP	3.61	□□□□□ -1.83
TFB1	YDR311W	HSV2	P50079	448 aa	Predicted RBP	3.61	□□□□□ -1.83
TFB1	YDR311W	UTP8	P53276	713 aa	Known RBP	3.61	□□□□□ -1.83
TFB1	YDR311W	TPO2	P53283	614 aa		3.61	□□□□□ -1.83
TFB1	YDR311W	YPL066W	Q12194	479 aa		3.61	□□□□□ -1.83
TFB1	YDR311W	INO1	P11986	533 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	SFP1	P32432	683 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	PRK1	P40494	810 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	YJR120W	P47157	116 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	TFB2	Q02939	513 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	TIF35	Q04067	274 aa	Known RBP	3.6	□□□□□ -1.83
TFB1	YDR311W	DED1	P06634	604 aa	Known RBP	3.6	□□□□□ -1.83
TFB1	YDR311W	TAF13	P11747	167 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	MKK2	P32491	506 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	SEC6	P32844	805 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	EXO5	P38289	585 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	PAF1	P38351	445 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	SKN7	P38889	622 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	CCT8	P47079	568 aa	Known RBP	3.6	□□□□□ -1.83
TFB1	YDR311W	PPT1	P53043	513 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	VPS72	Q03388	795 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	GLO4	Q12320	285 aa		3.6	□□□□□ -1.83
TFB1	YDR311W	TOP3	P13099	656 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	NCL1	P38205	684 aa	Known RBP	3.59	□□□□□ -1.83
TFB1	YDR311W	AMN1	P38285	549 aa	Predicted RBP	3.59	□□□□□ -1.83
TFB1	YDR311W	GDH3	P39708	457 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	BOI2	P39969	1040 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	YGL176C	P46945	554 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	YGR237C	P50089	785 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	PEX8	P53248	589 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	YNR014W	P53719	212 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	RAT1	Q02792	1006 aa	Known RBP	3.59	□□□□□ -1.83
TFB1	YDR311W	YPR053C	Q6Q5F3	151 aa		3.59	□□□□□ -1.83
TFB1	YDR311W	HVG1	P0CE11	249 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	FUS1	P11710	512 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	IDI1	P15496	288 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	YCK2	P23292	546 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	MRC1	P25588	1096 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	PEX6	P33760	1030 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	YJL181W	P46987	611 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	HLJ1	P48353	224 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	YMR187C	Q03236	431 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	UGO1	Q03327	502 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TMA17	Q12513	150 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-DR6	P0CX70	440 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-ER1	P0CX71	440 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-LR2	P0CX72	440 aa		3.58	□□□□□ -1.84
TFB1	YDR311W	TY1A-PL	P0CX73	440 aa		3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms