RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 MEGF6O75095 1541 aa14.78□□□□□ -0.04
SCARB2-222ENST00000640634 DISP2A7MBM2 1401 aa14.78□□□□□ -0.04
SCARB2-222ENST00000640634 SEPT12Q8IYM1 358 aa14.78□□□□□ -0.04
SCARB2-222ENST00000640634 IL13P35225 146 aa14.77□□□□□ -0.05
SCARB2-222ENST00000640634 FAM182BQ5T319 152 aa14.77□□□□□ -0.05
SCARB2-222ENST00000640634 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
SCARB2-222ENST00000640634 PAXIP1Q6ZW49 1069 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-222ENST00000640634 PARP4Q9UKK3 1724 aaKnown RBP14.76□□□□□ -0.05
SCARB2-222ENST00000640634 ONECUT3O60422 494 aaPredicted RBP14.75□□□□□ -0.05
SCARB2-222ENST00000640634 RALBP1Q15311 655 aa14.75□□□□□ -0.05
SCARB2-222ENST00000640634 BARGINQ6ZT62 677 aa14.75□□□□□ -0.05
SCARB2-222ENST00000640634 NCAPD2Q15021 1401 aa14.75□□□□□ -0.05
SCARB2-222ENST00000640634 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
SCARB2-222ENST00000640634 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
SCARB2-222ENST00000640634 CCDC184Q52MB2 194 aa14.74□□□□□ -0.05
SCARB2-222ENST00000640634 DIAPH1O60610 1272 aaKnown RBP14.73□□□□□ -0.05
SCARB2-222ENST00000640634 THRAP3Q9Y2W1 955 aaKnown RBP14.73□□□□□ -0.05
SCARB2-222ENST00000640634 SHANK3Q9BYB0 1731 aa14.73□□□□□ -0.05
SCARB2-222ENST00000640634 HMOX1P09601 288 aa14.72□□□□□ -0.05
SCARB2-222ENST00000640634 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
SCARB2-222ENST00000640634 BBXQ8WY36 941 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-222ENST00000640634 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
SCARB2-222ENST00000640634 IL2RBP14784 551 aa14.72□□□□□ -0.05
SCARB2-222ENST00000640634 U2SURPO15042 1029 aaKnown RBP14.71□□□□□ -0.05
SCARB2-222ENST00000640634 SULT6B1Q6IMI4 303 aa14.71□□□□□ -0.05
SCARB2-222ENST00000640634 OVOS2A0A0G2JMS6 1433 aa14.71□□□□□ -0.05
SCARB2-222ENST00000640634 TNS2Q63HR2 1409 aa14.7□□□□□ -0.06
SCARB2-222ENST00000640634 ANP32CO43423 234 aa14.69□□□□□ -0.06
SCARB2-222ENST00000640634 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
SCARB2-222ENST00000640634 SOCS7O14512 581 aa14.69□□□□□ -0.06
SCARB2-222ENST00000640634 DDB1Q16531 1140 aa14.69□□□□□ -0.06
SCARB2-222ENST00000640634 KRT27Q7Z3Y8 459 aa14.69□□□□□ -0.06
SCARB2-222ENST00000640634 KDRP35968 1356 aa14.68□□□□□ -0.06
SCARB2-222ENST00000640634 PKD1L3Q7Z443 1732 aa14.68□□□□□ -0.06
SCARB2-222ENST00000640634 MARCH10Q8NA82 808 aaPredicted RBP14.68□□□□□ -0.06
SCARB2-222ENST00000640634 RAPGEF4Q8WZA2 1011 aa14.68□□□□□ -0.06
SCARB2-222ENST00000640634 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-222ENST00000640634 TATP17735 454 aaPredicted RBP14.66□□□□□ -0.06
SCARB2-222ENST00000640634 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
SCARB2-222ENST00000640634 PDE3BQ13370 1112 aa14.66□□□□□ -0.06
SCARB2-222ENST00000640634 DIEXFQ68CQ4 756 aaKnown RBP14.66□□□□□ -0.06
SCARB2-222ENST00000640634 DDX54Q8TDD1 881 aaKnown RBP14.66□□□□□ -0.06
SCARB2-222ENST00000640634 EXOC5O00471 708 aa14.65□□□□□ -0.06
SCARB2-222ENST00000640634 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-222ENST00000640634 PTF1AQ7RTS3 328 aa14.64□□□□□ -0.07
SCARB2-222ENST00000640634 ZCRB1Q8TBF4 217 aaKnown RBP14.64□□□□□ -0.07
SCARB2-222ENST00000640634 CYP27B1O15528 508 aa14.63□□□□□ -0.07
SCARB2-222ENST00000640634 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
SCARB2-222ENST00000640634 PRKAR2BP31323 418 aa14.63□□□□□ -0.07
SCARB2-222ENST00000640634 PHACTR3Q96KR7 559 aa14.63□□□□□ -0.07
SCARB2-222ENST00000640634 TOGARAM1Q9Y4F4 1720 aa14.62□□□□□ -0.07
SCARB2-222ENST00000640634 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
SCARB2-222ENST00000640634 DOT1LQ8TEK3 1739 aa14.61□□□□□ -0.07
SCARB2-222ENST00000640634 ACSBG1Q96GR2 724 aa14.61□□□□□ -0.07
SCARB2-222ENST00000640634 MRS2Q9HD23 443 aa14.61□□□□□ -0.07
SCARB2-222ENST00000640634 SBF2Q86WG5 1849 aa14.6□□□□□ -0.07
SCARB2-222ENST00000640634 SENP3-EIF4A1A0A087X0R7 540 aa14.6□□□□□ -0.07
SCARB2-222ENST00000640634 MTHFSDQ2M296 383 aaKnown RBP14.6□□□□□ -0.07
SCARB2-222ENST00000640634 MIER1Q8N108 512 aa14.6□□□□□ -0.07
SCARB2-222ENST00000640634 PCDH11XQ9BZA7 1347 aa14.59□□□□□ -0.07
SCARB2-222ENST00000640634 PCDH11YQ9BZA8 1340 aa14.59□□□□□ -0.07
SCARB2-222ENST00000640634 KCNQ2O43526 872 aa14.59□□□□□ -0.07
SCARB2-222ENST00000640634 ZNF530Q6P9A1 599 aaPredicted RBP14.59□□□□□ -0.07
SCARB2-222ENST00000640634 CCDC146Q8IYE0 955 aa14.59□□□□□ -0.07
SCARB2-222ENST00000640634 ADAMTS8Q9UP79 889 aa14.59□□□□□ -0.07
SCARB2-222ENST00000640634 TNS1Q9HBL0 1735 aaKnown RBP14.59□□□□□ -0.07
SCARB2-222ENST00000640634 TRIM37O94972 964 aa14.58□□□□□ -0.07
SCARB2-222ENST00000640634 PHKG2P15735 406 aa14.58□□□□□ -0.07
SCARB2-222ENST00000640634 TSHZ2Q9NRE2 1034 aa14.58□□□□□ -0.07
SCARB2-222ENST00000640634 SPG7Q9UQ90 795 aa14.58□□□□□ -0.07
SCARB2-222ENST00000640634 KDM6AO15550 1401 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-222ENST00000640634 UPF1Q92900 1129 aaKnown RBP eCLIP14.58□□□□□ -0.08
SCARB2-222ENST00000640634 PLEKHF1Q96S99 279 aa14.58□□□□□ -0.08
SCARB2-222ENST00000640634 WDR43Q15061 677 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCARB2-222ENST00000640634 PLEKHO1Q53GL0 409 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-222ENST00000640634 FAM196AQ6ZSG2 479 aa14.57□□□□□ -0.08
SCARB2-222ENST00000640634 NHSQ6T4R5 1651 aa14.57□□□□□ -0.08
SCARB2-222ENST00000640634 FCHSD2O94868 740 aa14.56□□□□□ -0.08
SCARB2-222ENST00000640634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCARB2-222ENST00000640634 MPRIPQ6WCQ1 1025 aa14.55□□□□□ -0.08
SCARB2-222ENST00000640634 PNISRQ8TF01 805 aaKnown RBP14.55□□□□□ -0.08
SCARB2-222ENST00000640634 AMOTQ4VCS5 1084 aa14.55□□□□□ -0.08
SCARB2-222ENST00000640634 IFNL2Q8IZJ0 200 aa14.55□□□□□ -0.08
SCARB2-222ENST00000640634 SYTL4Q96C24 671 aaPredicted RBP14.55□□□□□ -0.08
SCARB2-222ENST00000640634 BCL9O00512 1426 aa14.54□□□□□ -0.08
SCARB2-222ENST00000640634 PLEKHG2Q9H7P9 1386 aa14.54□□□□□ -0.08
SCARB2-222ENST00000640634 PRIM1P49642 420 aaKnown RBP14.53□□□□□ -0.08
SCARB2-222ENST00000640634 DEFB132Q7Z7B7 95 aa14.53□□□□□ -0.08
SCARB2-222ENST00000640634 LGR6Q9HBX8 967 aa14.53□□□□□ -0.08
SCARB2-222ENST00000640634 RRP7AQ9Y3A4 280 aaKnown RBP14.53□□□□□ -0.08
SCARB2-222ENST00000640634 BTAF1O14981 1849 aa14.53□□□□□ -0.08
SCARB2-222ENST00000640634 ITGB4P16144 1822 aa14.53□□□□□ -0.08
SCARB2-222ENST00000640634 VIRMAQ69YN4 1812 aaKnown RBP14.53□□□□□ -0.08
SCARB2-222ENST00000640634 DLG5Q8TDM6 1919 aa14.53□□□□□ -0.08
SCARB2-222ENST00000640634 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-222ENST00000640634 C1orf141Q5JVX7 400 aa14.52□□□□□ -0.09
SCARB2-222ENST00000640634 FAM9BQ8IZU0 186 aa14.52□□□□□ -0.09
SCARB2-222ENST00000640634 ADAMTS7Q9UKP4 1686 aa14.52□□□□□ -0.09
SCARB2-222ENST00000640634 SCN11AQ9UI33 1791 aa14.52□□□□□ -0.09
SCARB2-222ENST00000640634 KAT6BQ8WYB5 2073 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms