RNA–Protein interactions for RNA: ENST00000637354.1

PTPRD-215, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5

Gene PTPRD, Length 891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-215ENST00000637354 VASH1Q7L8A9 365 aaPredicted RBP8.65□□□□□ -1.02
PTPRD-215ENST00000637354 SH3BP5LQ7L8J4 393 aa8.65□□□□□ -1.02
PTPRD-215ENST00000637354 ALG2Q9H553 416 aa8.65□□□□□ -1.02
PTPRD-215ENST00000637354 PPP1R15AO75807 674 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-215ENST00000637354 KCNMA1Q12791 1236 aa8.64□□□□□ -1.03
PTPRD-215ENST00000637354 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.64□□□□□ -1.03
PTPRD-215ENST00000637354 CCDC116Q8IYX3 515 aa8.64□□□□□ -1.03
PTPRD-215ENST00000637354 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
PTPRD-215ENST00000637354 RSF1Q96T23 1441 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-215ENST00000637354 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-215ENST00000637354 ZBTB7CA1YPR0 619 aa8.63□□□□□ -1.03
PTPRD-215ENST00000637354 SOX11P35716 441 aa8.63□□□□□ -1.03
PTPRD-215ENST00000637354 EIF4G2P78344 907 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTPRD-215ENST00000637354 FKBPLQ9UIM3 349 aa8.63□□□□□ -1.03
PTPRD-215ENST00000637354 DNMT3LQ9UJW3 386 aa8.63□□□□□ -1.03
PTPRD-215ENST00000637354 PALM3A6NDB9 673 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-215ENST00000637354 RNF225M0QZC1 329 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-215ENST00000637354 LMOD1P29536 600 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-215ENST00000637354 NR1H3Q13133 447 aa8.62□□□□□ -1.03
PTPRD-215ENST00000637354 CFAP70Q5T0N1 1121 aa8.62□□□□□ -1.03
PTPRD-215ENST00000637354 PBXIP1Q96AQ6 731 aa8.62□□□□□ -1.03
PTPRD-215ENST00000637354 CDV3Q9UKY7 258 aaKnown RBP8.62□□□□□ -1.03
PTPRD-215ENST00000637354 NESP48681 1621 aa8.62□□□□□ -1.03
PTPRD-215ENST00000637354 FBXO45P0C2W1 286 aa8.61□□□□□ -1.03
PTPRD-215ENST00000637354 TRAIPQ9BWF2 469 aa8.61□□□□□ -1.03
PTPRD-215ENST00000637354 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
PTPRD-215ENST00000637354 TFIP11Q9UBB9 837 aaKnown RBP8.61□□□□□ -1.03
PTPRD-215ENST00000637354 TTLL8A6PVC2 850 aa8.6□□□□□ -1.03
PTPRD-215ENST00000637354 ZBBXA8MT70 800 aa8.6□□□□□ -1.03
PTPRD-215ENST00000637354 AEBP1Q8IUX7 1158 aa8.6□□□□□ -1.03
PTPRD-215ENST00000637354 UCN2Q96RP3 112 aa8.6□□□□□ -1.03
PTPRD-215ENST00000637354 MAGEB6P1A0A0J9YX57 407 aa8.59□□□□□ -1.03
PTPRD-215ENST00000637354 NANOS1Q8WY41 292 aaKnown RBP8.59□□□□□ -1.03
PTPRD-215ENST00000637354 ZC3H4Q9UPT8 1303 aaKnown RBP8.58□□□□□ -1.04
PTPRD-215ENST00000637354 LOC100996750A0A140TA64 210 aa8.58□□□□□ -1.04
PTPRD-215ENST00000637354 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
PTPRD-215ENST00000637354 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
PTPRD-215ENST00000637354 Q6ZVU0 165 aa8.58□□□□□ -1.04
PTPRD-215ENST00000637354 KRTAP4-6Q9BYQ5 205 aa8.58□□□□□ -1.04
PTPRD-215ENST00000637354 SPINT1O43278 529 aa8.57□□□□□ -1.04
PTPRD-215ENST00000637354 DHX9Q08211 1270 aaKnown RBP8.57□□□□□ -1.04
PTPRD-215ENST00000637354 PDXDC2PQ6P474 469 aa8.57□□□□□ -1.04
PTPRD-215ENST00000637354 TBC1D9Q6ZT07 1266 aa8.57□□□□□ -1.04
PTPRD-215ENST00000637354 PTSQ03393 145 aa8.56□□□□□ -1.04
PTPRD-215ENST00000637354 PPP1R26Q5T8A7 1209 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-215ENST00000637354 CSB-PGBD3P0DP91 1061 aa8.55□□□□□ -1.04
PTPRD-215ENST00000637354 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
PTPRD-215ENST00000637354 SLC10A4Q96EP9 437 aa8.55□□□□□ -1.04
PTPRD-215ENST00000637354 CARD14Q9BXL6 1004 aa8.55□□□□□ -1.04
PTPRD-215ENST00000637354 MAFBQ9Y5Q3 323 aaPredicted RBP8.55□□□□□ -1.04
PTPRD-215ENST00000637354 PIK3CDO00329 1044 aa8.54□□□□□ -1.04
PTPRD-215ENST00000637354 ATP9BO43861 1147 aa8.54□□□□□ -1.04
PTPRD-215ENST00000637354 GSK3AP49840 483 aa8.54□□□□□ -1.04
PTPRD-215ENST00000637354 KRT76Q01546 638 aa8.54□□□□□ -1.04
PTPRD-215ENST00000637354 PTK2Q05397 1052 aa8.54□□□□□ -1.04
PTPRD-215ENST00000637354 PDE4CQ08493 712 aa8.54□□□□□ -1.04
PTPRD-215ENST00000637354 ARHGAP9Q9BRR9 750 aa8.54□□□□□ -1.04
PTPRD-215ENST00000637354 TOP2AP11388 1531 aaKnown RBP8.54□□□□□ -1.04
PTPRD-215ENST00000637354 SRPK2P78362 688 aaKnown RBP8.53□□□□□ -1.04
PTPRD-215ENST00000637354 TMEM151AQ8N4L1 468 aa8.53□□□□□ -1.04
PTPRD-215ENST00000637354 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
PTPRD-215ENST00000637354 CARNS1A5YM72 827 aa8.52□□□□□ -1.05
PTPRD-215ENST00000637354 SKIP12755 728 aa8.52□□□□□ -1.05
PTPRD-215ENST00000637354 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
PTPRD-215ENST00000637354 CNTNAP3BQ96NU0 1288 aa8.52□□□□□ -1.05
PTPRD-215ENST00000637354 KCTD15Q96SI1 283 aaPredicted RBP8.52□□□□□ -1.05
PTPRD-215ENST00000637354 CNTNAP3Q9BZ76 1288 aa8.52□□□□□ -1.05
PTPRD-215ENST00000637354 GPSM3Q9Y4H4 160 aa8.52□□□□□ -1.05
PTPRD-215ENST00000637354 KIF21AQ7Z4S6 1674 aa8.52□□□□□ -1.05
PTPRD-215ENST00000637354 SLC35F4A4IF30 521 aa8.51□□□□□ -1.05
PTPRD-215ENST00000637354 GPR161Q8N6U8 529 aaKnown RBP8.51□□□□□ -1.05
PTPRD-215ENST00000637354 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
PTPRD-215ENST00000637354 VRTNQ9H8Y1 702 aa8.51□□□□□ -1.05
PTPRD-215ENST00000637354 RASSF7Q02833 373 aa8.5□□□□□ -1.05
PTPRD-215ENST00000637354 CBLBQ13191 982 aa8.5□□□□□ -1.05
PTPRD-215ENST00000637354 ZBTB33Q86T24 672 aa8.5□□□□□ -1.05
PTPRD-215ENST00000637354 ADAMTS8Q9UP79 889 aa8.5□□□□□ -1.05
PTPRD-215ENST00000637354 GDF11O95390 407 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 SLURP2P0DP57 97 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 ITGA6P23229 1130 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 SUZ12Q15022 739 aaKnown RBP8.49□□□□□ -1.05
PTPRD-215ENST00000637354 NBPF20Q3BBV1 942 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 SLFNL1Q499Z3 407 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 ADAM32Q8TC27 787 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 TRIM52Q96A61 297 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 OCSTAMPQ9BR26 566 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 ERCC6Q03468 1493 aa8.49□□□□□ -1.05
PTPRD-215ENST00000637354 LAMC3Q9Y6N6 1575 aa8.48□□□□□ -1.05
PTPRD-215ENST00000637354 FIGNL2A6NMB9 653 aa8.48□□□□□ -1.05
PTPRD-215ENST00000637354 SVOPQ8N4V2 548 aa8.48□□□□□ -1.05
PTPRD-215ENST00000637354 CEP126Q9P2H0 1117 aa8.48□□□□□ -1.05
PTPRD-215ENST00000637354 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
PTPRD-215ENST00000637354 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
PTPRD-215ENST00000637354 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
PTPRD-215ENST00000637354 USP17L5A8MUK1 530 aa8.47□□□□□ -1.05
PTPRD-215ENST00000637354 ATG7O95352 703 aa8.47□□□□□ -1.05
PTPRD-215ENST00000637354 INTS6LQ5JSJ4 861 aaKnown RBP8.47□□□□□ -1.05
PTPRD-215ENST00000637354 ZNF385CQ66K41 422 aaPredicted RBP8.47□□□□□ -1.05
PTPRD-215ENST00000637354 USP17L2Q6R6M4 530 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms