RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
CACNA1A-236ENST00000637117 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
CACNA1A-236ENST00000637117 MARCH10Q8NA82 808 aaPredicted RBP13.28□□□□□ -0.28
CACNA1A-236ENST00000637117 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
CACNA1A-236ENST00000637117 ZBTB7AO95365 584 aa13.27□□□□□ -0.29
CACNA1A-236ENST00000637117 CDCA7Q9BWT1 371 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-236ENST00000637117 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-236ENST00000637117 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
CACNA1A-236ENST00000637117 PEAK1Q9H792 1746 aa13.26□□□□□ -0.29
CACNA1A-236ENST00000637117 SBF2Q86WG5 1849 aa13.25□□□□□ -0.29
CACNA1A-236ENST00000637117 WDR17Q8IZU2 1322 aa13.25□□□□□ -0.29
CACNA1A-236ENST00000637117 EXOC5O00471 708 aa13.25□□□□□ -0.29
CACNA1A-236ENST00000637117 PTGER2P43116 358 aa13.25□□□□□ -0.29
CACNA1A-236ENST00000637117 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
CACNA1A-236ENST00000637117 STK32BQ9NY57 414 aa13.25□□□□□ -0.29
CACNA1A-236ENST00000637117 USP6P35125 1406 aa13.24□□□□□ -0.29
CACNA1A-236ENST00000637117 TXNRD1Q16881 649 aa13.24□□□□□ -0.29
CACNA1A-236ENST00000637117 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
CACNA1A-236ENST00000637117 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
CACNA1A-236ENST00000637117 BCL9O00512 1426 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 RGPD3A6NKT7 1758 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 RGPD4Q7Z3J3 1758 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 CSB-PGBD3P0DP91 1061 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 SLC15A2Q16348 729 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 ZNF784Q8NCA9 323 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 SYT17Q9BSW7 474 aa13.23□□□□□ -0.29
CACNA1A-236ENST00000637117 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
CACNA1A-236ENST00000637117 SLIT3O75094 1523 aa13.22□□□□□ -0.29
CACNA1A-236ENST00000637117 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
CACNA1A-236ENST00000637117 SOX12O15370 315 aa13.21□□□□□ -0.29
CACNA1A-236ENST00000637117 PPP1R37O75864 691 aa13.21□□□□□ -0.29
CACNA1A-236ENST00000637117 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-236ENST00000637117 FHDC1Q9C0D6 1143 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-236ENST00000637117 COL18A1P39060 1754 aa13.21□□□□□ -0.29
CACNA1A-236ENST00000637117 TTC21BQ7Z4L5 1316 aa13.2□□□□□ -0.3
CACNA1A-236ENST00000637117 EVC2Q86UK5 1308 aa13.2□□□□□ -0.3
CACNA1A-236ENST00000637117 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
CACNA1A-236ENST00000637117 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
CACNA1A-236ENST00000637117 CPSF1Q10570 1443 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-236ENST00000637117 ACSBG1Q96GR2 724 aa13.17□□□□□ -0.3
CACNA1A-236ENST00000637117 ARXQ96QS3 562 aa13.17□□□□□ -0.3
CACNA1A-236ENST00000637117 MYOM1P52179 1685 aa13.17□□□□□ -0.3
CACNA1A-236ENST00000637117 CCDC7Q96M83 1385 aa13.17□□□□□ -0.3
CACNA1A-236ENST00000637117 UTRNP46939 3433 aa13.17□□□□□ -0.3
CACNA1A-236ENST00000637117 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
CACNA1A-236ENST00000637117 PIK3C2AO00443 1686 aa13.16□□□□□ -0.3
CACNA1A-236ENST00000637117 AKAP12Q02952 1782 aa13.16□□□□□ -0.3
CACNA1A-236ENST00000637117 RGPD5Q99666 1765 aa13.16□□□□□ -0.3
CACNA1A-236ENST00000637117 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.3
CACNA1A-236ENST00000637117 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.3
CACNA1A-236ENST00000637117 C1QTNF8P60827 252 aa13.14□□□□□ -0.31
CACNA1A-236ENST00000637117 L3MBTL2Q969R5 705 aa13.14□□□□□ -0.31
CACNA1A-236ENST00000637117 SENP3-EIF4A1A0A087X0R7 540 aa13.13□□□□□ -0.31
CACNA1A-236ENST00000637117 NLRP2Q9NX02 1062 aa13.13□□□□□ -0.31
CACNA1A-236ENST00000637117 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
CACNA1A-236ENST00000637117 KTN1Q86UP2 1357 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-236ENST00000637117 IL2RBP14784 551 aa13.12□□□□□ -0.31
CACNA1A-236ENST00000637117 GPR162Q16538 588 aa13.12□□□□□ -0.31
CACNA1A-236ENST00000637117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
CACNA1A-236ENST00000637117 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
CACNA1A-236ENST00000637117 CHD4Q14839 1912 aa13.11□□□□□ -0.31
CACNA1A-236ENST00000637117 LRRC4BQ9NT99 713 aa13.11□□□□□ -0.31
CACNA1A-236ENST00000637117 NFAT5O94916 1531 aa13.1□□□□□ -0.31
CACNA1A-236ENST00000637117 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
CACNA1A-236ENST00000637117 ERBB3P21860 1342 aa13.1□□□□□ -0.31
CACNA1A-236ENST00000637117 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
CACNA1A-236ENST00000637117 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
CACNA1A-236ENST00000637117 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
CACNA1A-236ENST00000637117 ANKRD24Q8TF21 1146 aa13.09□□□□□ -0.31
CACNA1A-236ENST00000637117 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
CACNA1A-236ENST00000637117 USP31Q70CQ4 1352 aa13.08□□□□□ -0.31
CACNA1A-236ENST00000637117 NME9Q86XW9 330 aa13.08□□□□□ -0.32
CACNA1A-236ENST00000637117 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
CACNA1A-236ENST00000637117 NHSQ6T4R5 1651 aa13.08□□□□□ -0.32
CACNA1A-236ENST00000637117 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-236ENST00000637117 POLD1P28340 1107 aa13.07□□□□□ -0.32
CACNA1A-236ENST00000637117 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
CACNA1A-236ENST00000637117 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-236ENST00000637117 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
CACNA1A-236ENST00000637117 ABCC6O95255 1503 aa13.07□□□□□ -0.32
CACNA1A-236ENST00000637117 E2F4Q16254 413 aa13.06□□□□□ -0.32
CACNA1A-236ENST00000637117 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-236ENST00000637117 TMC1Q8TDI8 760 aa13.06□□□□□ -0.32
CACNA1A-236ENST00000637117 ARHGEF1Q92888 912 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-236ENST00000637117 SIN3AQ96ST3 1273 aa13.06□□□□□ -0.32
CACNA1A-236ENST00000637117 BTAF1O14981 1849 aa13.05□□□□□ -0.32
CACNA1A-236ENST00000637117 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
CACNA1A-236ENST00000637117 MS4A3Q96HJ5 214 aa13.05□□□□□ -0.32
CACNA1A-236ENST00000637117 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
CACNA1A-236ENST00000637117 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
CACNA1A-236ENST00000637117 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-236ENST00000637117 KCNQ4P56696 695 aa13.04□□□□□ -0.32
CACNA1A-236ENST00000637117 HDGFL2Q7Z4V5 671 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-236ENST00000637117 SLC12A5Q9H2X9 1139 aa13.04□□□□□ -0.32
CACNA1A-236ENST00000637117 PNPLA7Q6ZV29 1317 aa13.04□□□□□ -0.32
CACNA1A-236ENST00000637117 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-236ENST00000637117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms