RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 PCDHB9Q9Y5E1 797 aa7.1□□□□□ -1.27
CDRT1-208ENST00000630868 MAGI3Q5TCQ9 1506 aa7.1□□□□□ -1.27
CDRT1-208ENST00000630868 WDR7Q9Y4E6 1490 aa7.1□□□□□ -1.27
CDRT1-208ENST00000630868 H3BRB1 525 aa7.09□□□□□ -1.27
CDRT1-208ENST00000630868 HSP90B1P14625 803 aaKnown RBP7.09□□□□□ -1.27
CDRT1-208ENST00000630868 FBXO33Q7Z6M2 555 aa7.09□□□□□ -1.27
CDRT1-208ENST00000630868 TUT1Q9H6E5 874 aaKnown RBP7.09□□□□□ -1.27
CDRT1-208ENST00000630868 ANO2Q9NQ90 1003 aa7.09□□□□□ -1.27
CDRT1-208ENST00000630868 TTBK1Q5TCY1 1321 aaPredicted RBP7.08□□□□□ -1.28
CDRT1-208ENST00000630868 RECKO95980 971 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 ABL1P00519 1130 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 PTPRNQ16849 979 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 EML3Q32P44 896 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 TSGA10IPQ3SY00 556 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 FAM177A1Q8N128 213 aaPredicted RBP7.08□□□□□ -1.28
CDRT1-208ENST00000630868 SLC4A5Q9BY07 1137 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 DNAAF2Q9NVR5 837 aaKnown RBP7.08□□□□□ -1.28
CDRT1-208ENST00000630868 CXXC1Q9P0U4 656 aaPredicted RBP7.08□□□□□ -1.28
CDRT1-208ENST00000630868 EGFL7Q9UHF1 273 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 KIAA0556O60303 1618 aa7.08□□□□□ -1.28
CDRT1-208ENST00000630868 LZTS3O60299 673 aaPredicted RBP7.07□□□□□ -1.28
CDRT1-208ENST00000630868 JUNDP17535 347 aa7.07□□□□□ -1.28
CDRT1-208ENST00000630868 VAMP1P23763 118 aa7.07□□□□□ -1.28
CDRT1-208ENST00000630868 CTHP32929 405 aa7.07□□□□□ -1.28
CDRT1-208ENST00000630868 BRICD5Q6PL45 260 aa7.07□□□□□ -1.28
CDRT1-208ENST00000630868 TAS1R3Q7RTX0 852 aa7.07□□□□□ -1.28
CDRT1-208ENST00000630868 PRIMPOLQ96LW4 560 aa7.07□□□□□ -1.28
CDRT1-208ENST00000630868 GPSM3Q9Y4H4 160 aa7.07□□□□□ -1.28
CDRT1-208ENST00000630868 CFAP43Q8NDM7 1665 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 RAPGEF2Q9Y4G8 1499 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 POTEB2H3BUK9 544 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 SIX5Q8N196 739 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 THAP11Q96EK4 314 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 C8orf37Q96NL8 207 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 CCDC85AQ96PX6 553 aaPredicted RBP7.06□□□□□ -1.28
CDRT1-208ENST00000630868 VPS9D1Q9Y2B5 631 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 CD109Q6YHK3 1445 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 ARAP3Q8WWN8 1544 aa7.06□□□□□ -1.28
CDRT1-208ENST00000630868 ZBTB7BO15156 539 aaPredicted RBP7.05□□□□□ -1.28
CDRT1-208ENST00000630868 ICMTO60725 284 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 PTK2Q05397 1052 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 ECM1Q16610 540 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 MAP7D1Q3KQU3 841 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 ZNF326Q5BKZ1 582 aaKnown RBP7.05□□□□□ -1.28
CDRT1-208ENST00000630868 PDXDC2PQ6P474 469 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 LAPTM4BQ86VI4 370 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 TRIM50Q86XT4 487 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 LARGE2Q8N3Y3 721 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 ADAM32Q8TC27 787 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 ZFRQ96KR1 1074 aaKnown RBP7.05□□□□□ -1.28
CDRT1-208ENST00000630868 NOD1Q9Y239 953 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 AXIN2Q9Y2T1 843 aa7.05□□□□□ -1.28
CDRT1-208ENST00000630868 ABCA8O94911 1581 aa7.04□□□□□ -1.28
CDRT1-208ENST00000630868 ARHGAP33O14559 1287 aa7.04□□□□□ -1.28
CDRT1-208ENST00000630868 LGR5O75473 907 aa7.04□□□□□ -1.28
CDRT1-208ENST00000630868 HMGB1P09429 215 aaKnown RBP7.04□□□□□ -1.28
CDRT1-208ENST00000630868 MAPK1P28482 360 aa7.04□□□□□ -1.28
CDRT1-208ENST00000630868 ATP1A2P50993 1020 aa7.04□□□□□ -1.28
CDRT1-208ENST00000630868 GLYCTKQ8IVS8 523 aa7.04□□□□□ -1.28
CDRT1-208ENST00000630868 SREK1Q8WXA9 508 aaKnown RBP7.04□□□□□ -1.28
CDRT1-208ENST00000630868 SALL2Q9Y467 1007 aaPredicted RBP7.04□□□□□ -1.28
CDRT1-208ENST00000630868 SFI1A8K8P3 1242 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 CCNYL3P0C7X3 344 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 CDK11BP21127 795 aaKnown RBP7.03□□□□□ -1.28
CDRT1-208ENST00000630868 GTF2IP78347 998 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 MTMR3Q13615 1198 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 ZNF592Q92610 1267 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 GPKOWQ92917 476 aaPredicted RBP eCLIP7.03□□□□□ -1.28
CDRT1-208ENST00000630868 ASB16Q96NS5 453 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 SEPT3Q9UH03 358 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 DOLKQ9UPQ8 538 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 CDK11AQ9UQ88 783 aaPredicted RBP7.03□□□□□ -1.28
CDRT1-208ENST00000630868 DNMT3AQ9Y6K1 912 aaPredicted RBP7.03□□□□□ -1.28
CDRT1-208ENST00000630868 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
CDRT1-208ENST00000630868 KIF21BO75037 1637 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 C21orf2O43822 256 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 SEC13P55735 322 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 MCCD1P59942 119 aaPredicted RBP7.02□□□□□ -1.29
CDRT1-208ENST00000630868 ARHGAP4P98171 946 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 OXLD1Q5BKU9 147 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 NBPF14Q5TI25 921 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 TPCN2Q8NHX9 752 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 MKNK1Q9BUB5 465 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 PHLDB1Q86UU1 1377 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 PTPRMP28827 1452 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 GOLGA3Q08378 1498 aa7.02□□□□□ -1.29
CDRT1-208ENST00000630868 FMNL1O95466 1100 aaPredicted RBP7.01□□□□□ -1.29
CDRT1-208ENST00000630868 ZC3H6P61129 1189 aaKnown RBP7.01□□□□□ -1.29
CDRT1-208ENST00000630868 CAPN12Q6ZSI9 719 aa7.01□□□□□ -1.29
CDRT1-208ENST00000630868 CCDC125Q86Z20 511 aa7.01□□□□□ -1.29
CDRT1-208ENST00000630868 SCUBE3Q8IX30 993 aa7.01□□□□□ -1.29
CDRT1-208ENST00000630868 GTF3C2Q8WUA4 911 aaPredicted RBP7.01□□□□□ -1.29
CDRT1-208ENST00000630868 DRC1Q96MC2 740 aa7.01□□□□□ -1.29
CDRT1-208ENST00000630868 PURBQ96QR8 312 aaKnown RBP7.01□□□□□ -1.29
CDRT1-208ENST00000630868 ARHGAP9Q9BRR9 750 aa7.01□□□□□ -1.29
CDRT1-208ENST00000630868 NBPF3Q9H094 633 aa7.01□□□□□ -1.29
CDRT1-208ENST00000630868 DCTN4Q9UJW0 460 aa7.01□□□□□ -1.29
CDRT1-208ENST00000630868 BHMG1C9JSJ3 638 aaPredicted RBP7□□□□□ -1.29
CDRT1-208ENST00000630868 DXOO77932 396 aaKnown RBP7□□□□□ -1.29
CDRT1-208ENST00000630868 APLP1P51693 650 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms