RNA–Protein interactions for RNA: ENST00000630720.3

TCF4-273, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-273ENST00000630720 SPATA31A5Q5VU36 1347 aa11.65□□□□□ -0.54
TCF4-273ENST00000630720 SPATA31A7Q8IWB4 1347 aa11.65□□□□□ -0.54
TCF4-273ENST00000630720 AMPHP49418 695 aa11.65□□□□□ -0.54
TCF4-273ENST00000630720 MTHFSP49914 203 aa11.65□□□□□ -0.54
TCF4-273ENST00000630720 HSP90AB2PQ58FF8 381 aa11.65□□□□□ -0.54
TCF4-273ENST00000630720 IP6K1Q92551 441 aa11.65□□□□□ -0.54
TCF4-273ENST00000630720 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
TCF4-273ENST00000630720 FAM98CQ17RN3 349 aaKnown RBP11.64□□□□□ -0.55
TCF4-273ENST00000630720 ANKRD24Q8TF21 1146 aa11.64□□□□□ -0.55
TCF4-273ENST00000630720 CFAP53Q96M91 514 aa11.64□□□□□ -0.55
TCF4-273ENST00000630720 RGS12O14924 1447 aa11.64□□□□□ -0.55
TCF4-273ENST00000630720 SPATA31A1Q5TZJ5 1347 aa11.64□□□□□ -0.55
TCF4-273ENST00000630720 CSB-PGBD3P0DP91 1061 aa11.63□□□□□ -0.55
TCF4-273ENST00000630720 TOM1L2Q6ZVM7 507 aa11.63□□□□□ -0.55
TCF4-273ENST00000630720 WDR17Q8IZU2 1322 aa11.63□□□□□ -0.55
TCF4-273ENST00000630720 PDE3BQ13370 1112 aa11.62□□□□□ -0.55
TCF4-273ENST00000630720 ERBB3P21860 1342 aa11.62□□□□□ -0.55
TCF4-273ENST00000630720 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
TCF4-273ENST00000630720 WDR43Q15061 677 aaKnown RBP eCLIP11.62□□□□□ -0.55
TCF4-273ENST00000630720 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
TCF4-273ENST00000630720 CRB1P82279 1406 aa11.61□□□□□ -0.55
TCF4-273ENST00000630720 A0A0G2JS52 829 aa11.61□□□□□ -0.55
TCF4-273ENST00000630720 NLRP2Q9NX02 1062 aa11.61□□□□□ -0.55
TCF4-273ENST00000630720 FLT4P35916 1363 aa11.61□□□□□ -0.55
TCF4-273ENST00000630720 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
TCF4-273ENST00000630720 ABCC6O95255 1503 aa11.6□□□□□ -0.55
TCF4-273ENST00000630720 SEPT12Q8IYM1 358 aa11.6□□□□□ -0.55
TCF4-273ENST00000630720 USHBP1Q8N6Y0 703 aa11.6□□□□□ -0.55
TCF4-273ENST00000630720 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
TCF4-273ENST00000630720 BRWD3Q6RI45 1802 aa11.59□□□□□ -0.55
TCF4-273ENST00000630720 FAM182BQ5T319 152 aa11.59□□□□□ -0.55
TCF4-273ENST00000630720 NBPF6Q5VWK0 638 aa11.59□□□□□ -0.55
TCF4-273ENST00000630720 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
TCF4-273ENST00000630720 NBPF4Q96M43 638 aa11.59□□□□□ -0.55
TCF4-273ENST00000630720 EP400Q96L91 3159 aa11.59□□□□□ -0.55
TCF4-273ENST00000630720 ONECUT3O60422 494 aaPredicted RBP11.58□□□□□ -0.55
TCF4-273ENST00000630720 B4GALNT3Q6L9W6 998 aa11.58□□□□□ -0.55
TCF4-273ENST00000630720 CARD10Q9BWT7 1032 aa11.58□□□□□ -0.55
TCF4-273ENST00000630720 CDK12Q9NYV4 1490 aaPredicted RBP11.57□□□□□ -0.56
TCF4-273ENST00000630720 THSD7AQ9UPZ6 1657 aa11.57□□□□□ -0.56
TCF4-273ENST00000630720 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
TCF4-273ENST00000630720 DIAPH1O60610 1272 aaKnown RBP11.57□□□□□ -0.56
TCF4-273ENST00000630720 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
TCF4-273ENST00000630720 BARGINQ6ZT62 677 aa11.57□□□□□ -0.56
TCF4-273ENST00000630720 ADAMTS8Q9UP79 889 aa11.57□□□□□ -0.56
TCF4-273ENST00000630720 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
TCF4-273ENST00000630720 KIF24Q5T7B8 1368 aa11.56□□□□□ -0.56
TCF4-273ENST00000630720 FANCIQ9NVI1 1328 aa11.56□□□□□ -0.56
TCF4-273ENST00000630720 U2AF1L5P0DN76 240 aaPredicted RBP11.55□□□□□ -0.56
TCF4-273ENST00000630720 U2AF1Q01081 240 aaKnown RBP eCLIP11.55□□□□□ -0.56
TCF4-273ENST00000630720 EYA1Q99502 592 aa11.55□□□□□ -0.56
TCF4-273ENST00000630720 ANP32EQ9BTT0 268 aa11.55□□□□□ -0.56
TCF4-273ENST00000630720 FAM208AQ9UK61 1670 aaKnown RBP11.55□□□□□ -0.56
TCF4-273ENST00000630720 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
TCF4-273ENST00000630720 THRAP3Q9Y2W1 955 aaKnown RBP11.54□□□□□ -0.56
TCF4-273ENST00000630720 WNK3Q9BYP7 1800 aa11.54□□□□□ -0.56
TCF4-273ENST00000630720 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
TCF4-273ENST00000630720 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
TCF4-273ENST00000630720 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
TCF4-273ENST00000630720 IL13P35225 146 aa11.53□□□□□ -0.56
TCF4-273ENST00000630720 RRP1P56182 461 aaKnown RBP11.53□□□□□ -0.56
TCF4-273ENST00000630720 CCDC136Q96JN2 1154 aa11.53□□□□□ -0.56
TCF4-273ENST00000630720 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
TCF4-273ENST00000630720 MEGF6O75095 1541 aa11.53□□□□□ -0.56
TCF4-273ENST00000630720 IL2RBP14784 551 aa11.52□□□□□ -0.57
TCF4-273ENST00000630720 AEBP1Q8IUX7 1158 aa11.52□□□□□ -0.57
TCF4-273ENST00000630720 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
TCF4-273ENST00000630720 PARP4Q9UKK3 1724 aaKnown RBP11.52□□□□□ -0.57
TCF4-273ENST00000630720 COL3A1P02461 1466 aaPredicted RBP11.52□□□□□ -0.57
TCF4-273ENST00000630720 DDB1Q16531 1140 aa11.51□□□□□ -0.57
TCF4-273ENST00000630720 MARCH10Q8NA82 808 aaPredicted RBP11.5□□□□□ -0.57
TCF4-273ENST00000630720 IGSF1Q8N6C5 1336 aa11.5□□□□□ -0.57
TCF4-273ENST00000630720 EXOC5O00471 708 aa11.5□□□□□ -0.57
TCF4-273ENST00000630720 HMOX1P09601 288 aa11.5□□□□□ -0.57
TCF4-273ENST00000630720 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
TCF4-273ENST00000630720 RGPD1P0DJD0 1748 aa11.49□□□□□ -0.57
TCF4-273ENST00000630720 NCAPD2Q15021 1401 aa11.49□□□□□ -0.57
TCF4-273ENST00000630720 SOCS7O14512 581 aa11.49□□□□□ -0.57
TCF4-273ENST00000630720 NEFMP07197 916 aa11.49□□□□□ -0.57
TCF4-273ENST00000630720 SULT6B1Q6IMI4 303 aa11.49□□□□□ -0.57
TCF4-273ENST00000630720 DDX54Q8TDD1 881 aaKnown RBP11.49□□□□□ -0.57
TCF4-273ENST00000630720 RAPGEF4Q8WZA2 1011 aa11.49□□□□□ -0.57
TCF4-273ENST00000630720 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
TCF4-273ENST00000630720 PNNQ9H307 717 aaKnown RBP11.49□□□□□ -0.57
TCF4-273ENST00000630720 TNS2Q63HR2 1409 aa11.48□□□□□ -0.57
TCF4-273ENST00000630720 PTF1AQ7RTS3 328 aa11.48□□□□□ -0.57
TCF4-273ENST00000630720 UPF1Q92900 1129 aaKnown RBP eCLIP11.48□□□□□ -0.57
TCF4-273ENST00000630720 RUNDC1Q96C34 613 aa11.48□□□□□ -0.57
TCF4-273ENST00000630720 SHANK3Q9BYB0 1731 aa11.48□□□□□ -0.57
TCF4-273ENST00000630720 OVOS2A0A0G2JMS6 1433 aa11.47□□□□□ -0.57
TCF4-273ENST00000630720 PITPNM1O00562 1244 aa11.47□□□□□ -0.57
TCF4-273ENST00000630720 APAF1O14727 1248 aa11.47□□□□□ -0.57
TCF4-273ENST00000630720 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
TCF4-273ENST00000630720 ZCRB1Q8TBF4 217 aaKnown RBP11.47□□□□□ -0.57
TCF4-273ENST00000630720 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
TCF4-273ENST00000630720 MAPK8IP3Q9UPT6 1336 aa11.47□□□□□ -0.57
TCF4-273ENST00000630720 FCHSD2O94868 740 aa11.46□□□□□ -0.57
TCF4-273ENST00000630720 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
TCF4-273ENST00000630720 NEUROD2Q15784 382 aa11.46□□□□□ -0.57
TCF4-273ENST00000630720 CHRDL2Q6WN34 429 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms