RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 SSFA2P28290 1259 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 ADAMTS8Q9UP79 889 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 DIAPH1O60610 1272 aaKnown RBP13.55□□□□□ -0.24
CLTC-215ENST00000621829 SART3Q15020 963 aaKnown RBP13.55□□□□□ -0.24
CLTC-215ENST00000621829 ANKRD1Q15327 319 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 MCM5P33992 734 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 TSPYL4Q9UJ04 414 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 CCDC6Q16204 474 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 TMEM132AQ24JP5 1023 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 CKAP2LQ8IYA6 745 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 SMAP1Q8IYB5 467 aaPredicted RBP13.55□□□□□ -0.24
CLTC-215ENST00000621829 WDR66Q8TBY9 1149 aa13.55□□□□□ -0.24
CLTC-215ENST00000621829 SURF6O75683 361 aaKnown RBP13.55□□□□□ -0.24
CLTC-215ENST00000621829 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.55□□□□□ -0.242e-10■□□□□ 10.7
CLTC-215ENST00000621829 V9GYY5 206 aaPredicted RBP13.55□□□□□ -0.24
CLTC-215ENST00000621829 SEPT6Q14141 434 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 DDX58O95786 925 aaKnown RBP13.54□□□□□ -0.24
CLTC-215ENST00000621829 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
CLTC-215ENST00000621829 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 COG3Q96JB2 828 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 KLHL10Q6JEL2 608 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 GSTTP1A0A1W2PQM5 241 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 CPLX3Q8WVH0 158 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
CLTC-215ENST00000621829 PDRG1Q9NUG6 133 aa13.53□□□□□ -0.24
CLTC-215ENST00000621829 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
CLTC-215ENST00000621829 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
CLTC-215ENST00000621829 HSF2BPO75031 334 aa13.53□□□□□ -0.24
CLTC-215ENST00000621829 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
CLTC-215ENST00000621829 CFAP57Q96MR6 1250 aa13.53□□□□□ -0.24
CLTC-215ENST00000621829 ARFGAP3Q9NP61 516 aa13.53□□□□□ -0.24
CLTC-215ENST00000621829 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.24
CLTC-215ENST00000621829 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.24
CLTC-215ENST00000621829 CEP83Q9Y592 693 aa13.52□□□□□ -0.24
CLTC-215ENST00000621829 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.24
CLTC-215ENST00000621829 RB1CC1Q8TDY2 1594 aa13.52□□□□□ -0.24
CLTC-215ENST00000621829 VPS18Q9P253 973 aa13.52□□□□□ -0.24
CLTC-215ENST00000621829 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
CLTC-215ENST00000621829 HIP1O00291 1037 aa13.52□□□□□ -0.25
CLTC-215ENST00000621829 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.25
CLTC-215ENST00000621829 IKQ13123 557 aaPredicted RBP13.52□□□□□ -0.25
CLTC-215ENST00000621829 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.25
CLTC-215ENST00000621829 JAKMIP1Q96N16 626 aaKnown RBP13.52□□□□□ -0.25
CLTC-215ENST00000621829 NOLC1Q14978 699 aaKnown RBP eCLIP13.52□□□□□ -0.257e-7■■■□□ 14.7
CLTC-215ENST00000621829 FERMT3Q86UX7 667 aa13.52□□□□□ -0.25
CLTC-215ENST00000621829 ANO10Q9NW15 660 aa13.52□□□□□ -0.25
CLTC-215ENST00000621829 OTUD6BQ8N6M0 293 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 PAFAH1B1P43034 410 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 GNAI1P63096 354 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 RIC3Q7Z5B4 369 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
CLTC-215ENST00000621829 GDPD2Q9HCC8 539 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 CASTP20810 708 aaKnown RBP13.51□□□□□ -0.25
CLTC-215ENST00000621829 ZSCAN23Q3MJ62 389 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 C6orf163Q5TEZ5 329 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 NUP133Q8WUM0 1156 aa13.51□□□□□ -0.25
CLTC-215ENST00000621829 A0A1B0GUL7 405 aa13.5□□□□□ -0.25
CLTC-215ENST00000621829 RSRC1Q96IZ7 334 aaKnown RBP13.5□□□□□ -0.25
CLTC-215ENST00000621829 ATRIPQ8WXE1 791 aa13.5□□□□□ -0.25
CLTC-215ENST00000621829 SSBP05455 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLTC-215ENST00000621829 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
CLTC-215ENST00000621829 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
CLTC-215ENST00000621829 ZNF428Q96B54 188 aa13.5□□□□□ -0.25
CLTC-215ENST00000621829 CCDC12Q8WUD4 166 aaPredicted RBP13.49□□□□□ -0.25
CLTC-215ENST00000621829 TBC1D2Q9BYX2 928 aa13.49□□□□□ -0.25
CLTC-215ENST00000621829 CWC27Q6UX04 472 aaKnown RBP13.49□□□□□ -0.25
CLTC-215ENST00000621829 CTNNBL1Q8WYA6 563 aaPredicted RBP13.49□□□□□ -0.25
CLTC-215ENST00000621829 KIF4AO95239 1232 aa13.49□□□□□ -0.25
CLTC-215ENST00000621829 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
CLTC-215ENST00000621829 CCDC83Q8IWF9 413 aa13.49□□□□□ -0.25
CLTC-215ENST00000621829 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLTC-215ENST00000621829 BRD4O60885 1362 aaPredicted RBP13.49□□□□□ -0.25
CLTC-215ENST00000621829 CCDC121Q6ZUS5 278 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 GNG11P61952 73 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 PDE3AQ14432 1141 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 PAIP2Q9BPZ3 127 aaKnown RBP13.48□□□□□ -0.25
CLTC-215ENST00000621829 JADE2Q9NQC1 790 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 WASHC2AQ641Q2 1341 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 CCDC69A6NI79 296 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
CLTC-215ENST00000621829 NEMFO60524 1076 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 GSDMDP57764 484 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 BLOC1S2Q6QNY1 142 aa13.48□□□□□ -0.25
CLTC-215ENST00000621829 DDX23Q9BUQ8 820 aaKnown RBP13.48□□□□□ -0.25
CLTC-215ENST00000621829 TRIM22Q8IYM9 498 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 NEBLO76041 1014 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 EBAG9O00559 213 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 KIF5BP33176 963 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
CLTC-215ENST00000621829 PPP6R1Q9UPN7 881 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 DNAJC21Q5F1R6 531 aaKnown RBP13.47□□□□□ -0.25
CLTC-215ENST00000621829 CCDC97Q96F63 343 aaPredicted RBP13.47□□□□□ -0.25
CLTC-215ENST00000621829 CCDC114Q96M63 670 aa13.47□□□□□ -0.25
CLTC-215ENST00000621829 SIL1Q9H173 461 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms