RNA–Protein interactions for RNA: ENST00000620511.1

TRIO-224, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-224ENST00000620511 CDCA7Q9BWT1 371 aaPredicted RBP12.87□□□□□ -0.35
TRIO-224ENST00000620511 U2SURPO15042 1029 aaKnown RBP12.86□□□□□ -0.35
TRIO-224ENST00000620511 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
TRIO-224ENST00000620511 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
TRIO-224ENST00000620511 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
TRIO-224ENST00000620511 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
TRIO-224ENST00000620511 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIO-224ENST00000620511 DDB1Q16531 1140 aa12.84□□□□□ -0.35
TRIO-224ENST00000620511 MARCH10Q8NA82 808 aaPredicted RBP12.84□□□□□ -0.35
TRIO-224ENST00000620511 PNISRQ8TF01 805 aaKnown RBP12.84□□□□□ -0.35
TRIO-224ENST00000620511 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
TRIO-224ENST00000620511 PLEKHG2Q9H7P9 1386 aa12.84□□□□□ -0.35
TRIO-224ENST00000620511 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.35
TRIO-224ENST00000620511 FAM182BQ5T319 152 aa12.83□□□□□ -0.35
TRIO-224ENST00000620511 PHACTR3Q96KR7 559 aa12.83□□□□□ -0.35
TRIO-224ENST00000620511 PLEKHF1Q96S99 279 aa12.83□□□□□ -0.35
TRIO-224ENST00000620511 ADAMTS8Q9UP79 889 aa12.83□□□□□ -0.35
TRIO-224ENST00000620511 SBF2Q86WG5 1849 aa12.83□□□□□ -0.36
TRIO-224ENST00000620511 EXOC5O00471 708 aa12.83□□□□□ -0.36
TRIO-224ENST00000620511 CYP27B1O15528 508 aa12.83□□□□□ -0.36
TRIO-224ENST00000620511 FCHSD2O94868 740 aa12.83□□□□□ -0.36
TRIO-224ENST00000620511 KRT27Q7Z3Y8 459 aa12.83□□□□□ -0.36
TRIO-224ENST00000620511 ZCRB1Q8TBF4 217 aaKnown RBP12.83□□□□□ -0.36
TRIO-224ENST00000620511 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
TRIO-224ENST00000620511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.361e-6■■■□□ 14.6
TRIO-224ENST00000620511 A0A0G2JS52 829 aa12.82□□□□□ -0.36
TRIO-224ENST00000620511 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
TRIO-224ENST00000620511 MYT1Q01538 1121 aa12.82□□□□□ -0.36
TRIO-224ENST00000620511 VIRMAQ69YN4 1812 aaKnown RBP12.8□□□□□ -0.36
TRIO-224ENST00000620511 CCER2I3L3R5 266 aa12.8□□□□□ -0.36
TRIO-224ENST00000620511 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
TRIO-224ENST00000620511 BCL9O00512 1426 aa12.8□□□□□ -0.36
TRIO-224ENST00000620511 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
TRIO-224ENST00000620511 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
TRIO-224ENST00000620511 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
TRIO-224ENST00000620511 DDX54Q8TDD1 881 aaKnown RBP12.79□□□□□ -0.36
TRIO-224ENST00000620511 PHKG2P15735 406 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 NKX1-1Q15270 411 aaPredicted RBP12.78□□□□□ -0.36
TRIO-224ENST00000620511 AMOTQ4VCS5 1084 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
TRIO-224ENST00000620511 SPG7Q9UQ90 795 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 ADAMTS7Q9UKP4 1686 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 PCDH11XQ9BZA7 1347 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 PCDH11YQ9BZA8 1340 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 WDR43Q15061 677 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRIO-224ENST00000620511 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
TRIO-224ENST00000620511 ITGB4P16144 1822 aa12.77□□□□□ -0.37
TRIO-224ENST00000620511 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.37
TRIO-224ENST00000620511 CCDC146Q8IYE0 955 aa12.77□□□□□ -0.37
TRIO-224ENST00000620511 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
TRIO-224ENST00000620511 DOT1LQ8TEK3 1739 aa12.76□□□□□ -0.37
TRIO-224ENST00000620511 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
TRIO-224ENST00000620511 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
TRIO-224ENST00000620511 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
TRIO-224ENST00000620511 TNS1Q9HBL0 1735 aaKnown RBP12.74□□□□□ -0.37
TRIO-224ENST00000620511 KCNQ2O43526 872 aa12.74□□□□□ -0.37
TRIO-224ENST00000620511 AKAP4Q5JQC9 854 aa12.74□□□□□ -0.37
TRIO-224ENST00000620511 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
TRIO-224ENST00000620511 NHSQ6T4R5 1651 aa12.74□□□□□ -0.37
TRIO-224ENST00000620511 FAM9BQ8IZU0 186 aa12.73□□□□□ -0.37
TRIO-224ENST00000620511 GAS2L2Q8NHY3 880 aa12.73□□□□□ -0.37
TRIO-224ENST00000620511 YTHDC1Q96MU7 727 aaKnown RBP12.73□□□□□ -0.37
TRIO-224ENST00000620511 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
TRIO-224ENST00000620511 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
TRIO-224ENST00000620511 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
TRIO-224ENST00000620511 MPRIPQ6WCQ1 1025 aa12.72□□□□□ -0.37
TRIO-224ENST00000620511 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
TRIO-224ENST00000620511 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
TRIO-224ENST00000620511 BTAF1O14981 1849 aa12.72□□□□□ -0.37
TRIO-224ENST00000620511 SIPA1L3O60292 1781 aaPredicted RBP12.72□□□□□ -0.37
TRIO-224ENST00000620511 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
TRIO-224ENST00000620511 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
TRIO-224ENST00000620511 PNNQ9H307 717 aaKnown RBP12.72□□□□□ -0.37
TRIO-224ENST00000620511 CEMIPQ8WUJ3 1361 aa12.71□□□□□ -0.37
TRIO-224ENST00000620511 MAP3K5Q99683 1374 aa12.71□□□□□ -0.37
TRIO-224ENST00000620511 GNAT3A8MTJ3 354 aa12.71□□□□□ -0.38
TRIO-224ENST00000620511 APAF1O14727 1248 aa12.71□□□□□ -0.38
TRIO-224ENST00000620511 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.38
TRIO-224ENST00000620511 TRIM37O94972 964 aa12.71□□□□□ -0.38
TRIO-224ENST00000620511 PRIM1P49642 420 aaKnown RBP12.71□□□□□ -0.38
TRIO-224ENST00000620511 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.38
TRIO-224ENST00000620511 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.38
TRIO-224ENST00000620511 RRP7AQ9Y3A4 280 aaKnown RBP12.71□□□□□ -0.38
TRIO-224ENST00000620511 MRC1P22897 1456 aa12.71□□□□□ -0.38
TRIO-224ENST00000620511 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
TRIO-224ENST00000620511 DCTN1Q14203 1278 aa12.7□□□□□ -0.38
TRIO-224ENST00000620511 MAPK8IP3Q9UPT6 1336 aa12.7□□□□□ -0.38
TRIO-224ENST00000620511 HSP90AB1P08238 724 aaKnown RBP12.69□□□□□ -0.38
TRIO-224ENST00000620511 BCL11BQ9C0K0 894 aaPredicted RBP12.69□□□□□ -0.38
TRIO-224ENST00000620511 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
TRIO-224ENST00000620511 RIPK4P57078 832 aa12.68□□□□□ -0.38
TRIO-224ENST00000620511 MCM10Q7L590 875 aa12.68□□□□□ -0.38
TRIO-224ENST00000620511 PIGBQ92521 554 aa12.68□□□□□ -0.38
TRIO-224ENST00000620511 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
TRIO-224ENST00000620511 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
TRIO-224ENST00000620511 THUMPD2Q9BTF0 503 aaKnown RBP12.67□□□□□ -0.38
TRIO-224ENST00000620511 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
TRIO-224ENST00000620511 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
TRIO-224ENST00000620511 NEFMP07197 916 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 351.1 ms