RNA–Protein interactions for RNA: ENST00000617708.1

GTF2IRD2B-207, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-207ENST00000617708 PTGIRP43119 386 aa11.29□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 LYSMD3Q7Z3D4 306 aa11.29□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 SKIV2LQ15477 1246 aaKnown RBP11.28□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
GTF2IRD2B-207ENST00000617708 ERVH48-1M5A8F1 160 aa11.27□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 LILRA1O75019 489 aa11.27□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 GAS6Q14393 721 aa11.26□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 SH3D19Q5HYK7 790 aa11.26□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 AP1G2O75843 785 aa11.25□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.25□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 CUEDC1Q9NWM3 386 aaPredicted RBP11.25□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 ERCC6Q03468 1493 aa11.25□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 FBXO31Q5XUX0 539 aaPredicted RBP11.24□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 KDF1Q8NAX2 398 aaPredicted RBP11.24□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 PEG3Q9GZU2 1588 aa11.24□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 ESPNB1AK53 854 aa11.23□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 MBIPQ9NS73 344 aa11.23□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 CUX2O14529 1486 aa11.22□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 SEPT12Q8IYM1 358 aa11.22□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 ZNF837Q96EG3 531 aaPredicted RBP11.22□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 MROH2BQ7Z745 1585 aa11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 PHF20L1A8MW92 1017 aa11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 RNF144AP50876 292 aaPredicted RBP11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 EPS8L1Q8TE68 723 aa11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 CYLDQ9NQC7 956 aa11.21□□□□□ -0.61
GTF2IRD2B-207ENST00000617708 TRIM22Q8IYM9 498 aa11.2□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 USP17L8P0C7I0 530 aa11.19□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 RHOQP17081 205 aa11.19□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 HMX1Q9NP08 348 aaPredicted RBP11.19□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 ERICH6Q7L0X2 663 aa11.18□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 PODNQ7Z5L7 613 aa11.18□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 DDRGK1Q96HY6 314 aa11.18□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 IGF1RP08069 1367 aa11.17□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 NESP48681 1621 aa11.17□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 GPC1P35052 558 aa11.17□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 GPR25O00155 361 aa11.16□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 RIPOR1Q6ZS17 1223 aa11.16□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 MSTNO14793 375 aa11.15□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 BCRP11274 1271 aa11.15□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 PLA2G4EQ3MJ16 856 aa11.15□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 NEDD1Q8NHV4 660 aa11.15□□□□□ -0.62
GTF2IRD2B-207ENST00000617708 H7C1W4 665 aa11.14□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 MEN1O00255 615 aa11.14□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 BEND7Q8N7W2 519 aaPredicted RBP11.14□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 DCAF5Q96JK2 942 aa11.14□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 DYRK1BQ9Y463 629 aa11.14□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 CNTNAP5Q8WYK1 1306 aa11.13□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 DBN1Q16643 649 aa11.13□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 TRERF1Q96PN7 1200 aa11.13□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 PDS5BQ9NTI5 1447 aa11.11□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 CCDC125Q86Z20 511 aa11.11□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 GTPBP3Q969Y2 492 aaKnown RBP11.11□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 SPOCK3Q9BQ16 436 aa11.11□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 FAM117AQ9C073 453 aa11.11□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 LAMC3Q9Y6N6 1575 aa11.11□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 XP32Q5T750 250 aa11.1□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 LRRC4BQ9NT99 713 aa11.1□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 NSFL1CQ9UNZ2 370 aaKnown RBP11.1□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 ADAM23O75077 832 aa11.09□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 CENPBP07199 599 aaPredicted RBP11.09□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 ACDQ96AP0 544 aa11.09□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 NLRP3Q96P20 1036 aa11.09□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
GTF2IRD2B-207ENST00000617708 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 MX2P20592 715 aa11.08□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 RFC5P40937 340 aa11.08□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 ZBBXA8MT70 800 aa11.07□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 ERVK-9P63128 1117 aa11.07□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 POU4F2Q12837 409 aa11.07□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 CC2D2BQ6DHV5 1058 aa11.07□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 GALNT6Q8NCL4 622 aa11.07□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 ACIN1Q9UKV3 1341 aaKnown RBP11.07□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 CYP2U1Q7Z449 544 aa11.06□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 ITGB2P05107 769 aa11.05□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 PROCP04070 461 aa11.04□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 CLN3Q13286 438 aa11.04□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
GTF2IRD2B-207ENST00000617708 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms