RNA–Protein interactions for RNA: ENST00000617708.1

GTF2IRD2B-207, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 3

Gene GTF2IRD2B, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-207ENST00000617708 AEBP2Q6ZN18 517 aaPredicted RBP34.68■■■■□ 3.14
GTF2IRD2B-207ENST00000617708 CHIC1Q5VXU3 224 aa32.81■■■□□ 2.84
GTF2IRD2B-207ENST00000617708 SENP3Q9H4L4 574 aaPredicted RBP29.71■■■□□ 2.35
GTF2IRD2B-207ENST00000617708 PHF23Q9BUL5 403 aaPredicted RBP29.24■■■□□ 2.27
GTF2IRD2B-207ENST00000617708 FOXD1Q16676 465 aa27.65■■■□□ 2.02
GTF2IRD2B-207ENST00000617708 POTEDQ86YR6 584 aa26.21■■□□□ 1.79
GTF2IRD2B-207ENST00000617708 PLPPR3Q6T4P5 718 aa26.17■■□□□ 1.78
GTF2IRD2B-207ENST00000617708 MSH5O43196 834 aa26.05■■□□□ 1.76
GTF2IRD2B-207ENST00000617708 PIAS4Q8N2W9 510 aaPredicted RBP25.85■■□□□ 1.73
GTF2IRD2B-207ENST00000617708 PPP6R1Q9UPN7 881 aa25.66■■□□□ 1.7
GTF2IRD2B-207ENST00000617708 ADRA2BP18089 450 aa25.6■■□□□ 1.69
GTF2IRD2B-207ENST00000617708 MAPK8IP2Q13387 824 aaPredicted RBP23.55■■□□□ 1.36
GTF2IRD2B-207ENST00000617708 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
GTF2IRD2B-207ENST00000617708 DMRT2Q9Y5R5 561 aa23.51■■□□□ 1.35
GTF2IRD2B-207ENST00000617708 PPP4R3CPQ6ZMV5 832 aa22.88■■□□□ 1.25
GTF2IRD2B-207ENST00000617708 CACNB1Q02641 598 aaPredicted RBP22.59■■□□□ 1.21
GTF2IRD2B-207ENST00000617708 DCAF8L1A6NGE4 600 aa22.58■■□□□ 1.21
GTF2IRD2B-207ENST00000617708 HOXD11P31277 338 aaPredicted RBP22.56■■□□□ 1.2
GTF2IRD2B-207ENST00000617708 CNKSR2Q8WXI2 1034 aa22.52■■□□□ 1.2
GTF2IRD2B-207ENST00000617708 RNF216Q9NWF9 866 aaPredicted RBP22.36■■□□□ 1.17
GTF2IRD2B-207ENST00000617708 RNF39Q9H2S5 420 aa22.15■■□□□ 1.14
GTF2IRD2B-207ENST00000617708 NCBP3Q53F19 620 aaKnown RBP22■■□□□ 1.11
GTF2IRD2B-207ENST00000617708 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
GTF2IRD2B-207ENST00000617708 C1QBPQ07021 282 aaKnown RBP21.84■■□□□ 1.09
GTF2IRD2B-207ENST00000617708 NPM3O75607 178 aaKnown RBP21.62■■□□□ 1.05
GTF2IRD2B-207ENST00000617708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.53■■□□□ 1.04
GTF2IRD2B-207ENST00000617708 U3KPZ7 1027 aaPredicted RBP21.03■□□□□ 0.96
GTF2IRD2B-207ENST00000617708 KCNA4P22459 653 aa21.02■□□□□ 0.96
GTF2IRD2B-207ENST00000617708 CAPN15O75808 1086 aa20.78■□□□□ 0.92
GTF2IRD2B-207ENST00000617708 SPINK5Q9NQ38 1064 aaPredicted RBP20.76■□□□□ 0.91
GTF2IRD2B-207ENST00000617708 SLC4A2P04920 1241 aa20.67■□□□□ 0.9
GTF2IRD2B-207ENST00000617708 DSG3P32926 999 aa20.67■□□□□ 0.9
GTF2IRD2B-207ENST00000617708 APLP2Q06481 763 aa20.53■□□□□ 0.88
GTF2IRD2B-207ENST00000617708 POTEHQ6S545 545 aa20.45■□□□□ 0.86
GTF2IRD2B-207ENST00000617708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
GTF2IRD2B-207ENST00000617708 HNRNPUL2Q1KMD3 747 aaKnown RBP20.44■□□□□ 0.86
GTF2IRD2B-207ENST00000617708 TRHP20396 242 aaPredicted RBP20.39■□□□□ 0.85
GTF2IRD2B-207ENST00000617708 ZNF219Q9P2Y4 722 aaPredicted RBP20.39■□□□□ 0.85
GTF2IRD2B-207ENST00000617708 SAMD1Q6SPF0 538 aaPredicted RBP20.29■□□□□ 0.84
GTF2IRD2B-207ENST00000617708 ABCB7O75027 752 aa20.26■□□□□ 0.83
GTF2IRD2B-207ENST00000617708 MYCNP04198 464 aaPredicted RBP20.05■□□□□ 0.8
GTF2IRD2B-207ENST00000617708 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
GTF2IRD2B-207ENST00000617708 RBM42Q9BTD8 480 aaKnown RBP19.81■□□□□ 0.76
GTF2IRD2B-207ENST00000617708 POLA2Q14181 598 aa19.78■□□□□ 0.76
GTF2IRD2B-207ENST00000617708 FOXD4L1Q9NU39 408 aa19.73■□□□□ 0.75
GTF2IRD2B-207ENST00000617708 ATF5Q9Y2D1 282 aaPredicted RBP19.51■□□□□ 0.71
GTF2IRD2B-207ENST00000617708 ZBTB12Q9Y330 459 aaPredicted RBP19.45■□□□□ 0.7
GTF2IRD2B-207ENST00000617708 CHRDL2Q6WN34 429 aa19.4■□□□□ 0.7
GTF2IRD2B-207ENST00000617708 ZBTB22O15209 634 aa19.3■□□□□ 0.68
GTF2IRD2B-207ENST00000617708 AKT1S1Q96B36 256 aa19.27■□□□□ 0.68
GTF2IRD2B-207ENST00000617708 OSCARQ8IYS5 282 aa19.18■□□□□ 0.66
GTF2IRD2B-207ENST00000617708 ATXN8OSP0DMR3 200 aa19.15■□□□□ 0.66
GTF2IRD2B-207ENST00000617708 REM2Q8IYK8 340 aaPredicted RBP19.06■□□□□ 0.64
GTF2IRD2B-207ENST00000617708 SP7Q8TDD2 431 aaPredicted RBP18.95■□□□□ 0.62
GTF2IRD2B-207ENST00000617708 FBLN2P98095 1184 aa18.88■□□□□ 0.61
GTF2IRD2B-207ENST00000617708 PIP4P2Q8N4L2 257 aa18.88■□□□□ 0.61
GTF2IRD2B-207ENST00000617708 PITPNM1O00562 1244 aa18.87■□□□□ 0.61
GTF2IRD2B-207ENST00000617708 SPDYE2BA6NHP3 402 aa18.8■□□□□ 0.6
GTF2IRD2B-207ENST00000617708 SPDYE6P0CI01 402 aa18.8■□□□□ 0.6
GTF2IRD2B-207ENST00000617708 SPDYE2Q495Y8 402 aa18.8■□□□□ 0.6
GTF2IRD2B-207ENST00000617708 FXR2P51116 673 aaKnown RBP eCLIP18.73■□□□□ 0.59
GTF2IRD2B-207ENST00000617708 MKRN4PQ13434 485 aaPredicted RBP18.62■□□□□ 0.57
GTF2IRD2B-207ENST00000617708 HAX1O00165 279 aa18.6■□□□□ 0.57
GTF2IRD2B-207ENST00000617708 SPDYE1Q8NFV5 336 aaPredicted RBP18.52■□□□□ 0.56
GTF2IRD2B-207ENST00000617708 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
GTF2IRD2B-207ENST00000617708 SSUH2Q9Y2M2 353 aa18.5■□□□□ 0.55
GTF2IRD2B-207ENST00000617708 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
GTF2IRD2B-207ENST00000617708 PRKAR2AP13861 404 aaKnown RBP18.39■□□□□ 0.53
GTF2IRD2B-207ENST00000617708 EVX2Q03828 476 aa18.28■□□□□ 0.52
GTF2IRD2B-207ENST00000617708 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
GTF2IRD2B-207ENST00000617708 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
GTF2IRD2B-207ENST00000617708 C19orf67A6NJJ6 358 aa18.15■□□□□ 0.5
GTF2IRD2B-207ENST00000617708 PRR29P0C7W0 189 aa18.15■□□□□ 0.5
GTF2IRD2B-207ENST00000617708 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
GTF2IRD2B-207ENST00000617708 EHMT2Q96KQ7 1210 aa17.96■□□□□ 0.47
GTF2IRD2B-207ENST00000617708 GABBR2O75899 941 aa17.91■□□□□ 0.46
GTF2IRD2B-207ENST00000617708 FARP1Q9Y4F1 1045 aaPredicted RBP17.85■□□□□ 0.45
GTF2IRD2B-207ENST00000617708 CD44P16070 742 aaKnown RBP17.81■□□□□ 0.44
GTF2IRD2B-207ENST00000617708 LHX8Q68G74 356 aa17.75■□□□□ 0.43
GTF2IRD2B-207ENST00000617708 STAG3Q9UJ98 1225 aa17.74■□□□□ 0.43
GTF2IRD2B-207ENST00000617708 SPDYE4A6NLX3 237 aa17.7■□□□□ 0.42
GTF2IRD2B-207ENST00000617708 CLCN6P51797 869 aa17.64■□□□□ 0.41
GTF2IRD2B-207ENST00000617708 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
GTF2IRD2B-207ENST00000617708 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
GTF2IRD2B-207ENST00000617708 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
GTF2IRD2B-207ENST00000617708 POTEIP0CG38 1075 aa17.5■□□□□ 0.39
GTF2IRD2B-207ENST00000617708 DCBLD2Q96PD2 775 aa17.44■□□□□ 0.38
GTF2IRD2B-207ENST00000617708 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
GTF2IRD2B-207ENST00000617708 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
GTF2IRD2B-207ENST00000617708 GALR2O43603 387 aaPredicted RBP17.29■□□□□ 0.36
GTF2IRD2B-207ENST00000617708 MNX1P50219 401 aaPredicted RBP17.27■□□□□ 0.36
GTF2IRD2B-207ENST00000617708 PHF12Q96QT6 1004 aa17.24■□□□□ 0.35
GTF2IRD2B-207ENST00000617708 PROM2Q8N271 834 aa17.22■□□□□ 0.35
GTF2IRD2B-207ENST00000617708 MS4A3Q96HJ5 214 aa17.01■□□□□ 0.31
GTF2IRD2B-207ENST00000617708 TSPYL2Q9H2G4 693 aaPredicted RBP16.99■□□□□ 0.31
GTF2IRD2B-207ENST00000617708 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
GTF2IRD2B-207ENST00000617708 OTUD5Q96G74 571 aa16.97■□□□□ 0.31
GTF2IRD2B-207ENST00000617708 ASTLQ6HA08 431 aaPredicted RBP16.94■□□□□ 0.3
GTF2IRD2B-207ENST00000617708 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
GTF2IRD2B-207ENST00000617708 PLSCR2Q9NRY7 297 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms