RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 VAC14Q08AM6 782 aa7.76□□□□□ -1.17
CFHR3-206ENST00000617219 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
CFHR3-206ENST00000617219 CDV3Q9UKY7 258 aaKnown RBP7.76□□□□□ -1.17
CFHR3-206ENST00000617219 PRDM2Q13029 1718 aa7.76□□□□□ -1.17
CFHR3-206ENST00000617219 ERFEQ4G0M1 354 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 MRGPRX2Q96LB1 330 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 C1QTNF2Q9BXJ5 285 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 TIMELESSQ9UNS1 1208 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 PCDHB9Q9Y5E1 797 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 TRAK2O60296 914 aa7.75□□□□□ -1.17
CFHR3-206ENST00000617219 TRMT44Q8IYL2 757 aaKnown RBP7.75□□□□□ -1.17
CFHR3-206ENST00000617219 FNBP4Q8N3X1 1017 aaPredicted RBP7.75□□□□□ -1.17
CFHR3-206ENST00000617219 K7ELQ4 463 aaPredicted RBP7.74□□□□□ -1.17
CFHR3-206ENST00000617219 SUPT5HO00267 1087 aaKnown RBP7.74□□□□□ -1.17
CFHR3-206ENST00000617219 SEMA3FQ13275 785 aa7.74□□□□□ -1.17
CFHR3-206ENST00000617219 CYP4X1Q8N118 509 aa7.74□□□□□ -1.17
CFHR3-206ENST00000617219 OCSTAMPQ9BR26 566 aa7.74□□□□□ -1.17
CFHR3-206ENST00000617219 TTC24A2A3L6 582 aaPredicted RBP7.73□□□□□ -1.17
CFHR3-206ENST00000617219 ARID5BQ14865 1188 aa7.73□□□□□ -1.17
CFHR3-206ENST00000617219 NBPF20Q3BBV1 942 aa7.73□□□□□ -1.17
CFHR3-206ENST00000617219 MPNDQ8N594 471 aa7.73□□□□□ -1.17
CFHR3-206ENST00000617219 IRS1P35568 1242 aa7.72□□□□□ -1.17
CFHR3-206ENST00000617219 KANK3Q6NY19 840 aa7.72□□□□□ -1.17
CFHR3-206ENST00000617219 VASH1Q7L8A9 365 aaPredicted RBP7.72□□□□□ -1.17
CFHR3-206ENST00000617219 SNIP1Q8TAD8 396 aaKnown RBP7.72□□□□□ -1.17
CFHR3-206ENST00000617219 TOPBP1Q92547 1522 aa7.72□□□□□ -1.17
CFHR3-206ENST00000617219 SIAH2O43255 324 aa7.71□□□□□ -1.18
CFHR3-206ENST00000617219 MAP4K5Q9Y4K4 846 aa7.71□□□□□ -1.18
CFHR3-206ENST00000617219 TLL2Q9Y6L7 1015 aa7.71□□□□□ -1.18
CFHR3-206ENST00000617219 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.18
CFHR3-206ENST00000617219 ZNF608Q9ULD9 1512 aaPredicted RBP7.7□□□□□ -1.18
CFHR3-206ENST00000617219 ALDH1A1P00352 501 aa7.7□□□□□ -1.18
CFHR3-206ENST00000617219 CDK15Q96Q40 435 aa7.7□□□□□ -1.18
CFHR3-206ENST00000617219 DNMBPQ6XZF7 1577 aa7.7□□□□□ -1.18
CFHR3-206ENST00000617219 POM121CA8CG34 1229 aa7.69□□□□□ -1.18
CFHR3-206ENST00000617219 TRIM52Q96A61 297 aa7.69□□□□□ -1.18
CFHR3-206ENST00000617219 ADH1CP00326 375 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 RNF20Q5VTR2 975 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 CCDC125Q86Z20 511 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 CALR3Q96L12 384 aaKnown RBP7.68□□□□□ -1.18
CFHR3-206ENST00000617219 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
CFHR3-206ENST00000617219 ZNF777Q9ULD5 760 aaPredicted RBP7.68□□□□□ -1.18
CFHR3-206ENST00000617219 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 NR5A1Q13285 461 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 SLFNL1Q499Z3 407 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 HDGFL1Q5TGJ6 251 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 GLMNQ92990 594 aa7.68□□□□□ -1.18
CFHR3-206ENST00000617219 SEPT12Q8IYM1 358 aa7.67□□□□□ -1.18
CFHR3-206ENST00000617219 SPOCK3Q9BQ16 436 aa7.67□□□□□ -1.18
CFHR3-206ENST00000617219 ALG2Q9H553 416 aa7.67□□□□□ -1.18
CFHR3-206ENST00000617219 CEP126Q9P2H0 1117 aa7.67□□□□□ -1.18
CFHR3-206ENST00000617219 POLA1P09884 1462 aaPredicted RBP7.66□□□□□ -1.18
CFHR3-206ENST00000617219 FSHRP23945 695 aa7.66□□□□□ -1.18
CFHR3-206ENST00000617219 DHX9Q08211 1270 aaKnown RBP7.66□□□□□ -1.18
CFHR3-206ENST00000617219 ABCC8Q09428 1581 aa7.66□□□□□ -1.18
CFHR3-206ENST00000617219 EIF4G3O43432 1585 aaKnown RBP7.65□□□□□ -1.19
CFHR3-206ENST00000617219 CUX1P39880 1505 aa7.65□□□□□ -1.19
CFHR3-206ENST00000617219 RAD54L2Q9Y4B4 1467 aa7.64□□□□□ -1.19
CFHR3-206ENST00000617219 J3QL48 77 aa7.64□□□□□ -1.19
CFHR3-206ENST00000617219 GIGYF1O75420 1035 aaPredicted RBP7.64□□□□□ -1.19
CFHR3-206ENST00000617219 VSIG8P0DPA2 414 aa7.64□□□□□ -1.19
CFHR3-206ENST00000617219 GRM5P41594 1212 aa7.64□□□□□ -1.19
CFHR3-206ENST00000617219 RAB15P59190 212 aa7.64□□□□□ -1.19
CFHR3-206ENST00000617219 NNTQ13423 1086 aa7.64□□□□□ -1.19
CFHR3-206ENST00000617219 RNF135Q8IUD6 432 aa7.64□□□□□ -1.19
CFHR3-206ENST00000617219 TARBP1Q13395 1621 aaKnown RBP7.64□□□□□ -1.19
CFHR3-206ENST00000617219 AQRO60306 1485 aaKnown RBP eCLIP7.64□□□□□ -1.19
CFHR3-206ENST00000617219 ESPNB1AK53 854 aa7.63□□□□□ -1.19
CFHR3-206ENST00000617219 INTS6LQ5JSJ4 861 aaKnown RBP7.63□□□□□ -1.19
CFHR3-206ENST00000617219 CCDC116Q8IYX3 515 aa7.63□□□□□ -1.19
CFHR3-206ENST00000617219 FGD5Q6ZNL6 1462 aa7.63□□□□□ -1.19
CFHR3-206ENST00000617219 SMPD1P17405 629 aa7.62□□□□□ -1.19
CFHR3-206ENST00000617219 ADAMTS19Q8TE59 1207 aa7.62□□□□□ -1.19
CFHR3-206ENST00000617219 CCDC97Q96F63 343 aaPredicted RBP7.62□□□□□ -1.19
CFHR3-206ENST00000617219 PGPEP1Q9NXJ5 209 aa7.62□□□□□ -1.19
CFHR3-206ENST00000617219 EMILIN1Q9Y6C2 1016 aa7.62□□□□□ -1.19
CFHR3-206ENST00000617219 ARID3CA6NKF2 412 aa7.62□□□□□ -1.19
CFHR3-206ENST00000617219 COBLO75128 1261 aa7.62□□□□□ -1.19
CFHR3-206ENST00000617219 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
CFHR3-206ENST00000617219 ESF1Q9H501 851 aaKnown RBP7.62□□□□□ -1.19
CFHR3-206ENST00000617219 SOGA1O94964 1423 aa7.61□□□□□ -1.19
CFHR3-206ENST00000617219 NFATC2IPQ8NCF5 419 aa7.61□□□□□ -1.19
CFHR3-206ENST00000617219 TDRD9Q8NDG6 1382 aaKnown RBP7.6□□□□□ -1.19
CFHR3-206ENST00000617219 SKIP12755 728 aa7.6□□□□□ -1.19
CFHR3-206ENST00000617219 MAP7D1Q3KQU3 841 aa7.6□□□□□ -1.19
CFHR3-206ENST00000617219 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
CFHR3-206ENST00000617219 DOLKQ9UPQ8 538 aa7.6□□□□□ -1.19
CFHR3-206ENST00000617219 PCDHB11Q9Y5F2 797 aa7.6□□□□□ -1.19
CFHR3-206ENST00000617219 ERVH48-1M5A8F1 160 aa7.59□□□□□ -1.19
CFHR3-206ENST00000617219 NR3C2P08235 984 aa7.59□□□□□ -1.19
CFHR3-206ENST00000617219 WDR4P57081 412 aaKnown RBP7.59□□□□□ -1.19
CFHR3-206ENST00000617219 PPP1R26Q5T8A7 1209 aaPredicted RBP7.59□□□□□ -1.19
CFHR3-206ENST00000617219 PHTF2Q8N3S3 785 aa7.59□□□□□ -1.19
CFHR3-206ENST00000617219 PLPP7Q8NBV4 271 aa7.59□□□□□ -1.19
CFHR3-206ENST00000617219 SIRT1Q96EB6 747 aa7.59□□□□□ -1.19
CFHR3-206ENST00000617219 KRTAP4-11Q9BYQ6 195 aa7.59□□□□□ -1.19
CFHR3-206ENST00000617219 LZTS3O60299 673 aaPredicted RBP7.58□□□□□ -1.2
CFHR3-206ENST00000617219 PLA2G4EQ3MJ16 856 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms