RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 SPATA31A1Q5TZJ5 1347 aa11.59□□□□□ -0.55
FAM228B-206ENST00000611138 DIAPH1O60610 1272 aaKnown RBP11.58□□□□□ -0.56
FAM228B-206ENST00000611138 GJD4Q96KN9 370 aaPredicted RBP11.58□□□□□ -0.56
FAM228B-206ENST00000611138 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
FAM228B-206ENST00000611138 PKD1L3Q7Z443 1732 aa11.57□□□□□ -0.56
FAM228B-206ENST00000611138 U2SURPO15042 1029 aaKnown RBP11.57□□□□□ -0.56
FAM228B-206ENST00000611138 IL13P35225 146 aa11.57□□□□□ -0.56
FAM228B-206ENST00000611138 NBPF6Q5VWK0 638 aa11.57□□□□□ -0.56
FAM228B-206ENST00000611138 NBPF4Q96M43 638 aa11.57□□□□□ -0.56
FAM228B-206ENST00000611138 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
FAM228B-206ENST00000611138 MEGF6O75095 1541 aa11.56□□□□□ -0.56
FAM228B-206ENST00000611138 A0A0G2JS52 829 aa11.56□□□□□ -0.56
FAM228B-206ENST00000611138 RBM6P78332 1123 aaKnown RBP11.56□□□□□ -0.56
FAM228B-206ENST00000611138 MYT1Q01538 1121 aa11.56□□□□□ -0.56
FAM228B-206ENST00000611138 NCAPD2Q15021 1401 aa11.56□□□□□ -0.56
FAM228B-206ENST00000611138 FAM98CQ17RN3 349 aaKnown RBP11.56□□□□□ -0.56
FAM228B-206ENST00000611138 EYA1Q99502 592 aa11.56□□□□□ -0.56
FAM228B-206ENST00000611138 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
FAM228B-206ENST00000611138 RGS12O14924 1447 aa11.55□□□□□ -0.56
FAM228B-206ENST00000611138 RXRBP28702 533 aa11.55□□□□□ -0.56
FAM228B-206ENST00000611138 CCDC184Q52MB2 194 aa11.55□□□□□ -0.56
FAM228B-206ENST00000611138 TCP11L2Q8N4U5 519 aa11.55□□□□□ -0.56
FAM228B-206ENST00000611138 IGSF1Q8N6C5 1336 aa11.55□□□□□ -0.56
FAM228B-206ENST00000611138 GABBR2O75899 941 aa11.54□□□□□ -0.56
FAM228B-206ENST00000611138 HMOX1P09601 288 aa11.54□□□□□ -0.56
FAM228B-206ENST00000611138 AEBP1Q8IUX7 1158 aa11.54□□□□□ -0.56
FAM228B-206ENST00000611138 DLG5Q8TDM6 1919 aa11.54□□□□□ -0.56
FAM228B-206ENST00000611138 SULT6B1Q6IMI4 303 aa11.53□□□□□ -0.56
FAM228B-206ENST00000611138 MIER1Q8N108 512 aa11.53□□□□□ -0.56
FAM228B-206ENST00000611138 MRS2Q9HD23 443 aa11.53□□□□□ -0.56
FAM228B-206ENST00000611138 NUDCQ9Y266 331 aa11.53□□□□□ -0.56
FAM228B-206ENST00000611138 THRAP3Q9Y2W1 955 aaKnown RBP11.53□□□□□ -0.56
FAM228B-206ENST00000611138 U2AF1L5P0DN76 240 aaPredicted RBP11.52□□□□□ -0.57
FAM228B-206ENST00000611138 IL2RBP14784 551 aa11.52□□□□□ -0.57
FAM228B-206ENST00000611138 U2AF1Q01081 240 aaKnown RBP eCLIP11.52□□□□□ -0.57
FAM228B-206ENST00000611138 BARGINQ6ZT62 677 aa11.52□□□□□ -0.57
FAM228B-206ENST00000611138 RAPGEF4Q8WZA2 1011 aa11.52□□□□□ -0.57
FAM228B-206ENST00000611138 KDRP35968 1356 aa11.52□□□□□ -0.57
FAM228B-206ENST00000611138 DOT1LQ8TEK3 1739 aa11.52□□□□□ -0.57
FAM228B-206ENST00000611138 OVOS2A0A0G2JMS6 1433 aa11.52□□□□□ -0.57
FAM228B-206ENST00000611138 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
FAM228B-206ENST00000611138 TATP17735 454 aaPredicted RBP11.51□□□□□ -0.57
FAM228B-206ENST00000611138 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
FAM228B-206ENST00000611138 SEPT12Q8IYM1 358 aa11.51□□□□□ -0.57
FAM228B-206ENST00000611138 SBF2Q86WG5 1849 aa11.5□□□□□ -0.57
FAM228B-206ENST00000611138 TOGARAM1Q9Y4F4 1720 aa11.49□□□□□ -0.57
FAM228B-206ENST00000611138 DDB1Q16531 1140 aa11.49□□□□□ -0.57
FAM228B-206ENST00000611138 CDCA7Q9BWT1 371 aaPredicted RBP11.49□□□□□ -0.57
FAM228B-206ENST00000611138 ONECUT3O60422 494 aaPredicted RBP11.48□□□□□ -0.57
FAM228B-206ENST00000611138 PRKAR2BP31323 418 aa11.48□□□□□ -0.57
FAM228B-206ENST00000611138 RSPH6AQ9H0K4 717 aa11.48□□□□□ -0.57
FAM228B-206ENST00000611138 SCN11AQ9UI33 1791 aa11.48□□□□□ -0.57
FAM228B-206ENST00000611138 ITGB4P16144 1822 aa11.48□□□□□ -0.57
FAM228B-206ENST00000611138 CCER2I3L3R5 266 aa11.47□□□□□ -0.57
FAM228B-206ENST00000611138 ZCRB1Q8TBF4 217 aaKnown RBP11.47□□□□□ -0.57
FAM228B-206ENST00000611138 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
FAM228B-206ENST00000611138 NHSQ6T4R5 1651 aa11.46□□□□□ -0.57
FAM228B-206ENST00000611138 EXOC5O00471 708 aa11.46□□□□□ -0.57
FAM228B-206ENST00000611138 PDE3BQ13370 1112 aa11.46□□□□□ -0.57
FAM228B-206ENST00000611138 CCDC146Q8IYE0 955 aa11.46□□□□□ -0.57
FAM228B-206ENST00000611138 FAM9BQ8IZU0 186 aa11.46□□□□□ -0.57
FAM228B-206ENST00000611138 DDX54Q8TDD1 881 aaKnown RBP11.46□□□□□ -0.57
FAM228B-206ENST00000611138 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.57
FAM228B-206ENST00000611138 ADAMTS8Q9UP79 889 aa11.46□□□□□ -0.57
FAM228B-206ENST00000611138 PCDH11XQ9BZA7 1347 aa11.45□□□□□ -0.58
FAM228B-206ENST00000611138 PCDH11YQ9BZA8 1340 aa11.45□□□□□ -0.58
FAM228B-206ENST00000611138 MAPK8IP3Q9UPT6 1336 aa11.45□□□□□ -0.58
FAM228B-206ENST00000611138 FCHSD2O94868 740 aa11.45□□□□□ -0.58
FAM228B-206ENST00000611138 PLEKHO1Q53GL0 409 aaPredicted RBP11.45□□□□□ -0.58
FAM228B-206ENST00000611138 FAM182BQ5T319 152 aa11.45□□□□□ -0.58
FAM228B-206ENST00000611138 KRT27Q7Z3Y8 459 aa11.45□□□□□ -0.58
FAM228B-206ENST00000611138 SPG7Q9UQ90 795 aa11.45□□□□□ -0.58
FAM228B-206ENST00000611138 TNS1Q9HBL0 1735 aaKnown RBP11.45□□□□□ -0.58
FAM228B-206ENST00000611138 PLEKHG2Q9H7P9 1386 aa11.44□□□□□ -0.58
FAM228B-206ENST00000611138 ADAMTS7Q9UKP4 1686 aa11.44□□□□□ -0.58
FAM228B-206ENST00000611138 NEFMP07197 916 aa11.44□□□□□ -0.58
FAM228B-206ENST00000611138 ZNF530Q6P9A1 599 aaPredicted RBP11.44□□□□□ -0.58
FAM228B-206ENST00000611138 MARCH10Q8NA82 808 aaPredicted RBP11.44□□□□□ -0.58
FAM228B-206ENST00000611138 PHACTR3Q96KR7 559 aa11.44□□□□□ -0.58
FAM228B-206ENST00000611138 BTAF1O14981 1849 aa11.44□□□□□ -0.58
FAM228B-206ENST00000611138 SIPA1L3O60292 1781 aaPredicted RBP11.44□□□□□ -0.58
FAM228B-206ENST00000611138 MTHFSDQ2M296 383 aaKnown RBP11.43□□□□□ -0.58
FAM228B-206ENST00000611138 AMOTQ4VCS5 1084 aa11.43□□□□□ -0.58
FAM228B-206ENST00000611138 PLEKHF1Q96S99 279 aa11.43□□□□□ -0.58
FAM228B-206ENST00000611138 PNNQ9H307 717 aaKnown RBP11.43□□□□□ -0.58
FAM228B-206ENST00000611138 EP400Q96L91 3159 aa11.43□□□□□ -0.58
FAM228B-206ENST00000611138 CYP27B1O15528 508 aa11.42□□□□□ -0.58
FAM228B-206ENST00000611138 PHKG2P15735 406 aa11.42□□□□□ -0.58
FAM228B-206ENST00000611138 C1orf141Q5JVX7 400 aa11.42□□□□□ -0.58
FAM228B-206ENST00000611138 ILDR2Q71H61 639 aa11.42□□□□□ -0.58
FAM228B-206ENST00000611138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.42□□□□□ -0.58
FAM228B-206ENST00000611138 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
FAM228B-206ENST00000611138 IFNL2Q8IZJ0 200 aa11.41□□□□□ -0.58
FAM228B-206ENST00000611138 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
FAM228B-206ENST00000611138 RUNDC1Q96C34 613 aa11.41□□□□□ -0.58
FAM228B-206ENST00000611138 KDM6AO15550 1401 aaPredicted RBP11.41□□□□□ -0.58
FAM228B-206ENST00000611138 MAP3K5Q99683 1374 aa11.41□□□□□ -0.58
FAM228B-206ENST00000611138 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
FAM228B-206ENST00000611138 RRP7AQ9Y3A4 280 aaKnown RBP11.4□□□□□ -0.58
FAM228B-206ENST00000611138 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms