RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	CASQ1	P31415	396 aa		19.98	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	KRT32	Q14532	448 aa		19.98	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	SCLT1	Q96NL6	688 aa		19.98	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	FKBP4	Q02790	459 aa	Known RBP eCLIP	19.97	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	LARP1	Q6PKG0	1096 aa	Known RBP	19.97	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	KIF5C	O60282	957 aa		19.97	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	PDIA4	P13667	645 aa	Known RBP	19.97	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	CABP2	Q9NPB3	220 aa		19.97	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	EXOSC9	Q06265	439 aa	Known RBP	19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	COMMD10	Q9Y6G5	202 aa		19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	DDX11	Q96FC9	970 aa		19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	RAI14	Q9P0K7	980 aa		19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	RNF187	Q5TA31	235 aa	Predicted RBP	19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	HDGFL1	Q5TGJ6	251 aa		19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	CACNA2D4	Q7Z3S7	1137 aa		19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	PNISR	Q8TF01	805 aa	Known RBP	19.96	■□□□□ 0.79
ZSWIM8-223	ENST00000605216	CABP4	P57796	275 aa		19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	NOB1	Q9ULX3	412 aa	Known RBP	19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	MAP3K11	Q16584	847 aa		19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	ABTB2	Q8N961	1025 aa		19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	JAKMIP1	Q96N16	626 aa	Known RBP	19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	DDX23	Q9BUQ8	820 aa	Known RBP	19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	SLC4A2	P04920	1241 aa		19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	RRBP1	Q9P2E9	1410 aa	Known RBP	19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CNTLN	Q9NXG0	1405 aa		19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	TCP11L2	Q8N4U5	519 aa		19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	STAC3	Q96MF2	364 aa		19.95	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	AACS	Q86V21	672 aa		19.94	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CCDC150	Q8NCX0	1101 aa		19.94	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	FAM107B	Q9H098	131 aa		19.94	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	PIBF1	Q8WXW3	757 aa		19.94	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	SFPQ	P23246	707 aa	Known RBP eCLIP	19.94	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	PTPN14	Q15678	1187 aa		19.94	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	BCCIP	Q9P287	314 aa	Known RBP eCLIP	19.94	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CCDC175	P0C221	793 aa		19.93	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	RRP9	O43818	475 aa	Known RBP	19.93	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	PRKAR2B	P31323	418 aa		19.93	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	MTHFS	P49914	203 aa		19.93	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	SEC63	Q9UGP8	760 aa	Known RBP	19.93	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	FER	P16591	822 aa		19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	GIGYF2	Q6Y7W6	1299 aa	Known RBP	19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	TAOK3	Q9H2K8	898 aa		19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	STRN4	Q9NRL3	753 aa		19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	MAPK8IP2	Q13387	824 aa	Predicted RBP	19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	KIF4B	Q2VIQ3	1234 aa		19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	TMOD2	Q9NZR1	351 aa		19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	FGFR1OP	O95684	399 aa	Known RBP	19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	PAFAH1B1	P43034	410 aa		19.92	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CTNNA2	P26232	953 aa		19.91	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	ADAMTS8	Q9UP79	889 aa		19.91	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	USO1	O60763	962 aa	Known RBP	19.91	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	PDE3A	Q14432	1141 aa		19.91	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	PABPN1L	A6NDY0	278 aa	Known RBP	19.91	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	LRP2BP	Q9P2M1	347 aa		19.91	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	ZNF287	Q9HBT7	754 aa		19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	C6orf163	Q5TEZ5	329 aa		19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CCDC83	Q8IWF9	413 aa		19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	JPH4	Q96JJ6	628 aa		19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	HOMER2	Q9NSB8	354 aa		19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	BRD4	O60885	1362 aa	Predicted RBP	19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CFAP57	Q96MR6	1250 aa		19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CIZ1	Q9ULV3	898 aa	Predicted RBP	19.9	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	MACROD2	A1Z1Q3	448 aa		19.89	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	CEP126	Q9P2H0	1117 aa		19.89	■□□□□ 0.78
ZSWIM8-223	ENST00000605216	KIF18A	Q8NI77	898 aa		19.89	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	PODXL2	Q9NZ53	605 aa		19.89	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	SPECC1	Q5M775	1068 aa		19.89	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	ESPN	B1AK53	854 aa		19.89	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	ESCO1	Q5FWF5	840 aa		19.89	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	UBA5	Q9GZZ9	404 aa		19.89	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	URI1	O94763	535 aa	Predicted RBP	19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	CWC27	Q6UX04	472 aa	Known RBP	19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	AIDA	Q96BJ3	306 aa		19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	FERMT2	Q96AC1	680 aa		19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	RAPGEF2	Q9Y4G8	1499 aa		19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	ANO10	Q9NW15	660 aa		19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	CCDC7	Q96M83	1385 aa		19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	TSNARE1	Q96NA8	513 aa		19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	SPECC1L	Q69YQ0	1117 aa		19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	NAA15	Q9BXJ9	866 aa	Known RBP	19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	PHAX	Q9H814	394 aa	Known RBP	19.88	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	TOP1	P11387	765 aa	Known RBP	19.87	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	SPG7	Q9UQ90	795 aa		19.87	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	NACAD	O15069	1562 aa		19.87	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	KIF20A	O95235	890 aa		19.87	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	CAMK4	Q16566	473 aa		19.87	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	MYL6B	P14649	208 aa		19.87	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	TMEM87A	Q8NBN3	555 aa		19.87	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	CALCOCO1	Q9P1Z2	691 aa		19.86	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	POTEB2	H3BUK9	544 aa		19.86	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	IGHMBP2	P38935	993 aa	Known RBP	19.86	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	CGN	Q9P2M7	1197 aa	Known RBP	19.86	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	FSD2	A1L4K1	749 aa		19.86	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	CHMP4BP1	P59074	171 aa		19.86	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	19.86	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	YEATS4	O95619	227 aa		19.85	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	DNA2	P51530	1060 aa		19.85	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	KLHL10	Q6JEL2	608 aa		19.85	■□□□□ 0.77
ZSWIM8-223	ENST00000605216	RAB34	Q9BZG1	259 aa		19.85	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms