RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 ACIN1Q9UKV3 1341 aaKnown RBP14.3□□□□□ -0.12
TUBD1-215ENST00000593110 RGPD3A6NKT7 1758 aaPredicted RBP14.29□□□□□ -0.12
TUBD1-215ENST00000593110 RGPD4Q7Z3J3 1758 aa14.29□□□□□ -0.12
TUBD1-215ENST00000593110 RGL3Q3MIN7 710 aa14.29□□□□□ -0.12
TUBD1-215ENST00000593110 APBA3O96018 575 aa14.28□□□□□ -0.12
TUBD1-215ENST00000593110 PRAM1Q96QH2 718 aa14.28□□□□□ -0.12
TUBD1-215ENST00000593110 PEAK1Q9H792 1746 aa14.27□□□□□ -0.12
TUBD1-215ENST00000593110 LMO7Q8WWI1 1683 aa14.27□□□□□ -0.12
TUBD1-215ENST00000593110 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
TUBD1-215ENST00000593110 KIAA0232Q92628 1395 aa14.27□□□□□ -0.12
TUBD1-215ENST00000593110 SLC34A2O95436 690 aa14.27□□□□□ -0.13
TUBD1-215ENST00000593110 ZSWIM6Q9HCJ5 1215 aa14.27□□□□□ -0.13
TUBD1-215ENST00000593110 SSH2Q76I76 1423 aa14.26□□□□□ -0.13
TUBD1-215ENST00000593110 DHX57Q6P158 1386 aaKnown RBP14.26□□□□□ -0.13
TUBD1-215ENST00000593110 SAFB2Q14151 953 aaKnown RBP eCLIP14.26□□□□□ -0.13
TUBD1-215ENST00000593110 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
TUBD1-215ENST00000593110 PARP4Q9UKK3 1724 aaKnown RBP14.26□□□□□ -0.13
TUBD1-215ENST00000593110 GPRASP1Q5JY77 1395 aa14.25□□□□□ -0.13
TUBD1-215ENST00000593110 ST18O60284 1047 aa14.25□□□□□ -0.13
TUBD1-215ENST00000593110 CFAP70Q5T0N1 1121 aa14.25□□□□□ -0.13
TUBD1-215ENST00000593110 PPARGC1BQ86YN6 1023 aaKnown RBP14.25□□□□□ -0.13
TUBD1-215ENST00000593110 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
TUBD1-215ENST00000593110 SPON1Q9HCB6 807 aa14.25□□□□□ -0.13
TUBD1-215ENST00000593110 ATP7BP35670 1465 aa14.25□□□□□ -0.13
TUBD1-215ENST00000593110 MYOM1P52179 1685 aa14.24□□□□□ -0.13
TUBD1-215ENST00000593110 KCNQ2O43526 872 aa14.24□□□□□ -0.13
TUBD1-215ENST00000593110 BARGINQ6ZT62 677 aa14.24□□□□□ -0.13
TUBD1-215ENST00000593110 CHRNA2Q15822 529 aa14.23□□□□□ -0.13
TUBD1-215ENST00000593110 E2F4Q16254 413 aa14.23□□□□□ -0.13
TUBD1-215ENST00000593110 ITSN1Q15811 1721 aa14.22□□□□□ -0.13
TUBD1-215ENST00000593110 TBC1D12O60347 775 aa14.22□□□□□ -0.13
TUBD1-215ENST00000593110 PTCD2Q8WV60 388 aaKnown RBP14.22□□□□□ -0.13
TUBD1-215ENST00000593110 SBF2Q86WG5 1849 aa14.22□□□□□ -0.13
TUBD1-215ENST00000593110 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
TUBD1-215ENST00000593110 TOPAZ1Q8N9V7 1692 aa14.21□□□□□ -0.13
TUBD1-215ENST00000593110 ZNF784Q8NCA9 323 aaPredicted RBP14.21□□□□□ -0.13
TUBD1-215ENST00000593110 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
TUBD1-215ENST00000593110 ANO8Q9HCE9 1232 aaPredicted RBP14.21□□□□□ -0.13
TUBD1-215ENST00000593110 PCDHGA4Q9Y5G9 962 aa14.21□□□□□ -0.13
TUBD1-215ENST00000593110 LRRC37A3O60309 1634 aa14.2□□□□□ -0.14
TUBD1-215ENST00000593110 CAMK2BQ13554 666 aa14.2□□□□□ -0.14
TUBD1-215ENST00000593110 NBPF8Q3BBV2 869 aa14.2□□□□□ -0.14
TUBD1-215ENST00000593110 NBPF14Q5TI25 921 aa14.2□□□□□ -0.14
TUBD1-215ENST00000593110 STRN4Q9NRL3 753 aa14.2□□□□□ -0.14
TUBD1-215ENST00000593110 PPP1R1BQ9UD71 204 aaPredicted RBP14.2□□□□□ -0.14
TUBD1-215ENST00000593110 ARSIQ5FYB1 569 aa14.19□□□□□ -0.14
TUBD1-215ENST00000593110 OXER1Q8TDS5 423 aa14.19□□□□□ -0.14
TUBD1-215ENST00000593110 HOXB1P14653 301 aaPredicted RBP14.18□□□□□ -0.14
TUBD1-215ENST00000593110 GPR153Q6NV75 609 aa14.18□□□□□ -0.14
TUBD1-215ENST00000593110 EMILIN3Q9NT22 766 aa14.18□□□□□ -0.14
TUBD1-215ENST00000593110 KDM2AQ9Y2K7 1162 aa14.18□□□□□ -0.14
TUBD1-215ENST00000593110 CPDO75976 1380 aa14.18□□□□□ -0.14
TUBD1-215ENST00000593110 ARHGEF28Q8N1W1 1705 aaKnown RBP14.18□□□□□ -0.14
TUBD1-215ENST00000593110 WASLO00401 505 aaPredicted RBP14.17□□□□□ -0.14
TUBD1-215ENST00000593110 LARP1Q6PKG0 1096 aaKnown RBP14.17□□□□□ -0.14
TUBD1-215ENST00000593110 PDGFDQ9GZP0 370 aaPredicted RBP14.17□□□□□ -0.14
TUBD1-215ENST00000593110 POGKQ9P215 609 aa14.17□□□□□ -0.14
TUBD1-215ENST00000593110 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
TUBD1-215ENST00000593110 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
TUBD1-215ENST00000593110 CEP350Q5VT06 3117 aa14.17□□□□□ -0.14
TUBD1-215ENST00000593110 MINK1Q8N4C8 1332 aaPredicted RBP14.16□□□□□ -0.14
TUBD1-215ENST00000593110 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 WNK3Q9BYP7 1800 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 PTGER2P43116 358 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 ZC3H6P61129 1189 aaKnown RBP14.16□□□□□ -0.14
TUBD1-215ENST00000593110 MAP3K9P80192 1104 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 PDE3BQ13370 1112 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 MPHOSPH9Q99550 1183 aa14.16□□□□□ -0.14
TUBD1-215ENST00000593110 POLR3AO14802 1390 aaPredicted RBP14.16□□□□□ -0.14
TUBD1-215ENST00000593110 USP19O94966 1318 aa14.15□□□□□ -0.14
TUBD1-215ENST00000593110 CHD4Q14839 1912 aa14.15□□□□□ -0.14
TUBD1-215ENST00000593110 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
TUBD1-215ENST00000593110 TCP11L2Q8N4U5 519 aa14.15□□□□□ -0.14
TUBD1-215ENST00000593110 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
TUBD1-215ENST00000593110 PLSCR1O15162 318 aa14.14□□□□□ -0.15
TUBD1-215ENST00000593110 KHSRPQ92945 711 aaKnown RBP eCLIP14.14□□□□□ -0.151e-7■■■■□ 24
TUBD1-215ENST00000593110 TRAK1Q9UPV9 953 aa14.14□□□□□ -0.15
TUBD1-215ENST00000593110 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
TUBD1-215ENST00000593110 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
TUBD1-215ENST00000593110 NUDT7P0C024 238 aa14.13□□□□□ -0.15
TUBD1-215ENST00000593110 THRAP3Q9Y2W1 955 aaKnown RBP14.13□□□□□ -0.15
TUBD1-215ENST00000593110 SENP3-EIF4A1A0A087X0R7 540 aa14.12□□□□□ -0.15
TUBD1-215ENST00000593110 EMP3P54852 163 aa14.12□□□□□ -0.15
TUBD1-215ENST00000593110 IFFO2Q5TF58 517 aa14.12□□□□□ -0.15
TUBD1-215ENST00000593110 PTF1AQ7RTS3 328 aa14.12□□□□□ -0.15
TUBD1-215ENST00000593110 MARVELD3Q96A59 401 aa14.12□□□□□ -0.15
TUBD1-215ENST00000593110 BCL9O00512 1426 aa14.12□□□□□ -0.15
TUBD1-215ENST00000593110 DPYSL4O14531 572 aa14.11□□□□□ -0.15
TUBD1-215ENST00000593110 C1QTNF8P60827 252 aa14.11□□□□□ -0.15
TUBD1-215ENST00000593110 CRB1P82279 1406 aa14.11□□□□□ -0.15
TUBD1-215ENST00000593110 NUTM2GQ5VZR2 741 aa14.11□□□□□ -0.15
TUBD1-215ENST00000593110 GOLGB1Q14789 3259 aaKnown RBP14.1□□□□□ -0.15
TUBD1-215ENST00000593110 ZBTB7AO95365 584 aa14.1□□□□□ -0.15
TUBD1-215ENST00000593110 PAPPAQ13219 1627 aa14.1□□□□□ -0.15
TUBD1-215ENST00000593110 C11orf95C9JLR9 678 aaPredicted RBP14.09□□□□□ -0.15
TUBD1-215ENST00000593110 KCNV2Q8TDN2 545 aa14.09□□□□□ -0.15
TUBD1-215ENST00000593110 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
TUBD1-215ENST00000593110 COL18A1P39060 1754 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms