RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 DNMT3LQ9UJW3 386 aa12.62□□□□□ -0.39
SNRPD1-202ENST00000577906 CHIC2Q9UKJ5 165 aa12.62□□□□□ -0.39
SNRPD1-202ENST00000577906 CTSOP43234 321 aaPredicted RBP12.61□□□□□ -0.39
SNRPD1-202ENST00000577906 MAP7D1Q3KQU3 841 aa12.61□□□□□ -0.39
SNRPD1-202ENST00000577906 NPAS3Q8IXF0 933 aa12.61□□□□□ -0.39
SNRPD1-202ENST00000577906 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
SNRPD1-202ENST00000577906 FIGNL2A6NMB9 653 aa12.6□□□□□ -0.39
SNRPD1-202ENST00000577906 TRAK2O60296 914 aa12.6□□□□□ -0.39
SNRPD1-202ENST00000577906 TREML4Q6UXN2 200 aa12.6□□□□□ -0.39
SNRPD1-202ENST00000577906 PROSER2Q86WR7 435 aaPredicted RBP12.6□□□□□ -0.39
SNRPD1-202ENST00000577906 OSBPL3Q9H4L5 887 aa12.6□□□□□ -0.39
SNRPD1-202ENST00000577906 TSGA10IPQ3SY00 556 aa12.59□□□□□ -0.39
SNRPD1-202ENST00000577906 A0A1W2PRU2 124 aa12.58□□□□□ -0.4
SNRPD1-202ENST00000577906 A6NJR5 290 aa12.58□□□□□ -0.4
SNRPD1-202ENST00000577906 WFS1O76024 890 aa12.58□□□□□ -0.4
SNRPD1-202ENST00000577906 PLPP7Q8NBV4 271 aa12.58□□□□□ -0.4
SNRPD1-202ENST00000577906 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
SNRPD1-202ENST00000577906 POM121CA8CG34 1229 aa12.57□□□□□ -0.4
SNRPD1-202ENST00000577906 GNRH1P01148 92 aa12.57□□□□□ -0.4
SNRPD1-202ENST00000577906 NFX1Q12986 1120 aaKnown RBP12.57□□□□□ -0.4
SNRPD1-202ENST00000577906 OXLD1Q5BKU9 147 aa12.57□□□□□ -0.4
SNRPD1-202ENST00000577906 MEN1O00255 615 aa12.56□□□□□ -0.4
SNRPD1-202ENST00000577906 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
SNRPD1-202ENST00000577906 RNF217Q8TC41 542 aa12.56□□□□□ -0.4
SNRPD1-202ENST00000577906 NLRP3Q96P20 1036 aa12.56□□□□□ -0.4
SNRPD1-202ENST00000577906 RNF144AP50876 292 aaPredicted RBP12.55□□□□□ -0.4
SNRPD1-202ENST00000577906 NFATC2IPQ8NCF5 419 aa12.55□□□□□ -0.4
SNRPD1-202ENST00000577906 GPC1P35052 558 aa12.54□□□□□ -0.4
SNRPD1-202ENST00000577906 CLN3Q13286 438 aa12.54□□□□□ -0.4
SNRPD1-202ENST00000577906 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
SNRPD1-202ENST00000577906 FOXD4L5Q5VV16 416 aaPredicted RBP12.54□□□□□ -0.4
SNRPD1-202ENST00000577906 SKIP12755 728 aa12.53□□□□□ -0.4
SNRPD1-202ENST00000577906 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
SNRPD1-202ENST00000577906 H3BM21 787 aa12.52□□□□□ -0.41
SNRPD1-202ENST00000577906 PIK3CDO00329 1044 aa12.52□□□□□ -0.41
SNRPD1-202ENST00000577906 LZTS3O60299 673 aaPredicted RBP12.52□□□□□ -0.41
SNRPD1-202ENST00000577906 LYSMD3Q7Z3D4 306 aa12.52□□□□□ -0.41
SNRPD1-202ENST00000577906 PTSQ03393 145 aa12.51□□□□□ -0.41
SNRPD1-202ENST00000577906 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
SNRPD1-202ENST00000577906 ESCO1Q5FWF5 840 aa12.5□□□□□ -0.41
SNRPD1-202ENST00000577906 LCE2AQ5TA79 106 aaPredicted RBP12.5□□□□□ -0.41
SNRPD1-202ENST00000577906 VEGFBP49765 207 aa12.49□□□□□ -0.41
SNRPD1-202ENST00000577906 EML3Q32P44 896 aa12.49□□□□□ -0.41
SNRPD1-202ENST00000577906 SLC27A3Q5K4L6 730 aa12.49□□□□□ -0.41
SNRPD1-202ENST00000577906 IRF7Q92985 503 aa12.49□□□□□ -0.41
SNRPD1-202ENST00000577906 ESYT1Q9BSJ8 1104 aa12.49□□□□□ -0.41
SNRPD1-202ENST00000577906 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
SNRPD1-202ENST00000577906 CNKSR1Q969H4 720 aa12.48□□□□□ -0.41
SNRPD1-202ENST00000577906 RAB6BQ9NRW1 208 aa12.48□□□□□ -0.41
SNRPD1-202ENST00000577906 PRICKLE2Q7Z3G6 844 aa12.47□□□□□ -0.41
SNRPD1-202ENST00000577906 XAGE2Q96GT9 111 aa12.47□□□□□ -0.41
SNRPD1-202ENST00000577906 IL2RAP01589 272 aa12.46□□□□□ -0.41
SNRPD1-202ENST00000577906 GLMNQ92990 594 aa12.46□□□□□ -0.41
SNRPD1-202ENST00000577906 GRIP2Q9C0E4 1043 aa12.46□□□□□ -0.41
SNRPD1-202ENST00000577906 NOD1Q9Y239 953 aa12.46□□□□□ -0.41
SNRPD1-202ENST00000577906 SLC35F4A4IF30 521 aa12.45□□□□□ -0.42
SNRPD1-202ENST00000577906 USP17L5A8MUK1 530 aa12.45□□□□□ -0.42
SNRPD1-202ENST00000577906 CCDC155Q8N6L0 562 aa12.45□□□□□ -0.42
SNRPD1-202ENST00000577906 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
SNRPD1-202ENST00000577906 CENPCQ03188 943 aa12.44□□□□□ -0.42
SNRPD1-202ENST00000577906 NCOA4Q13772 614 aa12.43□□□□□ -0.42
SNRPD1-202ENST00000577906 CALR3Q96L12 384 aaKnown RBP12.43□□□□□ -0.42
SNRPD1-202ENST00000577906 ATP9BO43861 1147 aa12.42□□□□□ -0.42
SNRPD1-202ENST00000577906 GTF2E1P29083 439 aaPredicted RBP12.42□□□□□ -0.42
SNRPD1-202ENST00000577906 TBC1D9Q6ZT07 1266 aa12.42□□□□□ -0.42
SNRPD1-202ENST00000577906 UCN2Q96RP3 112 aa12.42□□□□□ -0.42
SNRPD1-202ENST00000577906 ETNK1Q9HBU6 452 aa12.42□□□□□ -0.42
SNRPD1-202ENST00000577906 HRH3Q9Y5N1 445 aa12.42□□□□□ -0.42
SNRPD1-202ENST00000577906 SPATA31C2B4DYI2 1134 aa12.41□□□□□ -0.42
SNRPD1-202ENST00000577906 VSIG8P0DPA2 414 aa12.41□□□□□ -0.42
SNRPD1-202ENST00000577906 RHOQP17081 205 aa12.41□□□□□ -0.42
SNRPD1-202ENST00000577906 WDR44Q5JSH3 913 aa12.41□□□□□ -0.42
SNRPD1-202ENST00000577906 PLEKHM2Q8IWE5 1019 aa12.41□□□□□ -0.42
SNRPD1-202ENST00000577906 DEPDC4Q8N2C3 294 aa12.41□□□□□ -0.42
SNRPD1-202ENST00000577906 ZSCAN10Q96SZ4 725 aaPredicted RBP12.41□□□□□ -0.42
SNRPD1-202ENST00000577906 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
SNRPD1-202ENST00000577906 GDF10P55107 478 aa12.4□□□□□ -0.42
SNRPD1-202ENST00000577906 POU4F2Q12837 409 aa12.4□□□□□ -0.42
SNRPD1-202ENST00000577906 PCDHGA11Q9Y5H2 935 aa12.4□□□□□ -0.42
SNRPD1-202ENST00000577906 ERBB4Q15303 1308 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 USP17L3A6NCW0 530 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 USP17L4A6NCW7 530 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 INHAP05111 366 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 GTF2IP78347 998 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 LCE2CQ5TA81 110 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 USP17L2Q6R6M4 530 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 USP17L1Q7RTZ2 530 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 TRIM50Q86XT4 487 aa12.39□□□□□ -0.43
SNRPD1-202ENST00000577906 WASLO00401 505 aaPredicted RBP12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 WIPF1O43516 503 aa12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 ITGA6P23229 1130 aa12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 SCNN1DP51172 638 aa12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 NBPF10Q6P3W6 841 aaKnown RBP12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 TAS1R3Q7RTX0 852 aa12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
SNRPD1-202ENST00000577906 PSME1Q06323 249 aa12.37□□□□□ -0.43
SNRPD1-202ENST00000577906 TLR1Q15399 786 aa12.37□□□□□ -0.43
SNRPD1-202ENST00000577906 GNASQ5JWF2 1037 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms