RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 AEBP2Q6ZN18 517 aaPredicted RBP35.17■■■■□ 3.22
SNRPD1-202ENST00000577906 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
SNRPD1-202ENST00000577906 PHF23Q9BUL5 403 aaPredicted RBP29.98■■■□□ 2.39
SNRPD1-202ENST00000577906 SENP3Q9H4L4 574 aaPredicted RBP29.98■■■□□ 2.39
SNRPD1-202ENST00000577906 FOXD1Q16676 465 aa27.79■■■□□ 2.04
SNRPD1-202ENST00000577906 PLPPR3Q6T4P5 718 aa27.69■■■□□ 2.02
SNRPD1-202ENST00000577906 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
SNRPD1-202ENST00000577906 ADRA2BP18089 450 aa26.51■■□□□ 1.83
SNRPD1-202ENST00000577906 PIAS4Q8N2W9 510 aaPredicted RBP26.18■■□□□ 1.78
SNRPD1-202ENST00000577906 MSH5O43196 834 aa25.8■■□□□ 1.72
SNRPD1-202ENST00000577906 POTEDQ86YR6 584 aa24.55■■□□□ 1.52
SNRPD1-202ENST00000577906 SCAF1Q9H7N4 1312 aaKnown RBP24.38■■□□□ 1.49
SNRPD1-202ENST00000577906 PPP4R3CPQ6ZMV5 832 aa24.35■■□□□ 1.49
SNRPD1-202ENST00000577906 MAPK8IP2Q13387 824 aaPredicted RBP24.1■■□□□ 1.45
SNRPD1-202ENST00000577906 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
SNRPD1-202ENST00000577906 CNKSR2Q8WXI2 1034 aa23.75■■□□□ 1.39
SNRPD1-202ENST00000577906 NCBP3Q53F19 620 aaKnown RBP23.72■■□□□ 1.39
SNRPD1-202ENST00000577906 KCNA4P22459 653 aa23.47■■□□□ 1.35
SNRPD1-202ENST00000577906 RNF216Q9NWF9 866 aaPredicted RBP23.34■■□□□ 1.33
SNRPD1-202ENST00000577906 HOXD11P31277 338 aaPredicted RBP23.29■■□□□ 1.32
SNRPD1-202ENST00000577906 NPM3O75607 178 aaKnown RBP23.26■■□□□ 1.31
SNRPD1-202ENST00000577906 DCAF8L1A6NGE4 600 aa22.86■■□□□ 1.25
SNRPD1-202ENST00000577906 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
SNRPD1-202ENST00000577906 SLC4A1APQ9BWU0 796 aaKnown RBP22.36■■□□□ 1.17
SNRPD1-202ENST00000577906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.15
SNRPD1-202ENST00000577906 RNF39Q9H2S5 420 aa22.04■■□□□ 1.12
SNRPD1-202ENST00000577906 SLC4A2P04920 1241 aa22.01■■□□□ 1.11
SNRPD1-202ENST00000577906 C1QBPQ07021 282 aaKnown RBP21.81■■□□□ 1.08
SNRPD1-202ENST00000577906 U3KPZ7 1027 aaPredicted RBP21.78■■□□□ 1.08
SNRPD1-202ENST00000577906 FOXD4L1Q9NU39 408 aa21.72■■□□□ 1.07
SNRPD1-202ENST00000577906 CACNB1Q02641 598 aaPredicted RBP21.67■■□□□ 1.06
SNRPD1-202ENST00000577906 MYCNP04198 464 aaPredicted RBP21.56■■□□□ 1.04
SNRPD1-202ENST00000577906 ZBTB22O15209 634 aa21.55■■□□□ 1.04
SNRPD1-202ENST00000577906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.53■■□□□ 1.04
SNRPD1-202ENST00000577906 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
SNRPD1-202ENST00000577906 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
SNRPD1-202ENST00000577906 EHMT2Q96KQ7 1210 aa21.41■■□□□ 1.02
SNRPD1-202ENST00000577906 APLP2Q06481 763 aa21.39■■□□□ 1.01
SNRPD1-202ENST00000577906 CSRNP3Q8WYN3 585 aa21.28■■□□□ 1
SNRPD1-202ENST00000577906 SPINK5Q9NQ38 1064 aaPredicted RBP21.22■□□□□ 0.99
SNRPD1-202ENST00000577906 CAPN15O75808 1086 aa21.21■□□□□ 0.99
SNRPD1-202ENST00000577906 ZNF219Q9P2Y4 722 aaPredicted RBP21.07■□□□□ 0.96
SNRPD1-202ENST00000577906 TRHP20396 242 aaPredicted RBP21.04■□□□□ 0.96
SNRPD1-202ENST00000577906 ATXN8OSP0DMR3 200 aa21.03■□□□□ 0.96
SNRPD1-202ENST00000577906 ATF5Q9Y2D1 282 aaPredicted RBP20.9■□□□□ 0.94
SNRPD1-202ENST00000577906 DSG3P32926 999 aa20.88■□□□□ 0.93
SNRPD1-202ENST00000577906 ABCB7O75027 752 aa20.74■□□□□ 0.91
SNRPD1-202ENST00000577906 POLA2Q14181 598 aa20.65■□□□□ 0.9
SNRPD1-202ENST00000577906 ZBTB12Q9Y330 459 aaPredicted RBP20.36■□□□□ 0.85
SNRPD1-202ENST00000577906 FBLN2P98095 1184 aa20.17■□□□□ 0.82
SNRPD1-202ENST00000577906 MKRN4PQ13434 485 aaPredicted RBP20■□□□□ 0.79
SNRPD1-202ENST00000577906 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
SNRPD1-202ENST00000577906 OSCARQ8IYS5 282 aa19.93■□□□□ 0.78
SNRPD1-202ENST00000577906 SPDYE2BA6NHP3 402 aa19.76■□□□□ 0.75
SNRPD1-202ENST00000577906 SPDYE6P0CI01 402 aa19.76■□□□□ 0.75
SNRPD1-202ENST00000577906 SPDYE2Q495Y8 402 aa19.76■□□□□ 0.75
SNRPD1-202ENST00000577906 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
SNRPD1-202ENST00000577906 ZNF692Q9BU19 519 aaPredicted RBP19.64■□□□□ 0.73
SNRPD1-202ENST00000577906 SSUH2Q9Y2M2 353 aa19.54■□□□□ 0.72
SNRPD1-202ENST00000577906 SPDYE4A6NLX3 237 aa19.5■□□□□ 0.71
SNRPD1-202ENST00000577906 REM2Q8IYK8 340 aaPredicted RBP19.44■□□□□ 0.7
SNRPD1-202ENST00000577906 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
SNRPD1-202ENST00000577906 FKBP8Q14318 412 aa19.28■□□□□ 0.68
SNRPD1-202ENST00000577906 SPDYE1Q8NFV5 336 aaPredicted RBP19.24■□□□□ 0.67
SNRPD1-202ENST00000577906 PITPNM1O00562 1244 aa19.2■□□□□ 0.66
SNRPD1-202ENST00000577906 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
SNRPD1-202ENST00000577906 CLEC11AQ9Y240 323 aa19.14■□□□□ 0.65
SNRPD1-202ENST00000577906 PROM2Q8N271 834 aa19.12■□□□□ 0.65
SNRPD1-202ENST00000577906 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
SNRPD1-202ENST00000577906 POTEHQ6S545 545 aa19.02■□□□□ 0.64
SNRPD1-202ENST00000577906 PRR29P0C7W0 189 aa18.96■□□□□ 0.63
SNRPD1-202ENST00000577906 FXR2P51116 673 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNRPD1-202ENST00000577906 PIP4P2Q8N4L2 257 aa18.88■□□□□ 0.61
SNRPD1-202ENST00000577906 PRKAR2AP13861 404 aaKnown RBP18.74■□□□□ 0.59
SNRPD1-202ENST00000577906 FBXO3Q9UK99 471 aa18.74■□□□□ 0.59
SNRPD1-202ENST00000577906 CHADLQ6NUI6 762 aa18.65■□□□□ 0.58
SNRPD1-202ENST00000577906 CREBZFQ9NS37 354 aa18.6■□□□□ 0.57
SNRPD1-202ENST00000577906 MIER1Q8N108 512 aa18.55■□□□□ 0.56
SNRPD1-202ENST00000577906 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
SNRPD1-202ENST00000577906 PLCD3Q8N3E9 789 aa18.5■□□□□ 0.55
SNRPD1-202ENST00000577906 FARP1Q9Y4F1 1045 aaPredicted RBP18.49■□□□□ 0.55
SNRPD1-202ENST00000577906 VASPP50552 380 aaPredicted RBP18.42■□□□□ 0.54
SNRPD1-202ENST00000577906 HAX1O00165 279 aa18.38■□□□□ 0.53
SNRPD1-202ENST00000577906 NPM1P06748 294 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNRPD1-202ENST00000577906 MNX1P50219 401 aaPredicted RBP18.36■□□□□ 0.53
SNRPD1-202ENST00000577906 ZBTB47Q9UFB7 747 aaPredicted RBP18.35■□□□□ 0.53
SNRPD1-202ENST00000577906 C19orf67A6NJJ6 358 aa18.27■□□□□ 0.52
SNRPD1-202ENST00000577906 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
SNRPD1-202ENST00000577906 CD44P16070 742 aaKnown RBP18.19■□□□□ 0.5
SNRPD1-202ENST00000577906 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
SNRPD1-202ENST00000577906 IFNLR1Q8IU57 520 aaPredicted RBP18.12■□□□□ 0.49
SNRPD1-202ENST00000577906 EVX2Q03828 476 aa18.11■□□□□ 0.49
SNRPD1-202ENST00000577906 ZRANB1Q9UGI0 708 aa18.06■□□□□ 0.48
SNRPD1-202ENST00000577906 NUBP1P53384 320 aa18.05■□□□□ 0.48
SNRPD1-202ENST00000577906 SP7Q8TDD2 431 aaPredicted RBP18.03■□□□□ 0.48
SNRPD1-202ENST00000577906 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
SNRPD1-202ENST00000577906 SPOCK2Q92563 424 aa18.01■□□□□ 0.47
SNRPD1-202ENST00000577906 TSPYL2Q9H2G4 693 aaPredicted RBP18■□□□□ 0.47
SNRPD1-202ENST00000577906 FAM212AQ96EL1 285 aa17.96■□□□□ 0.47
SNRPD1-202ENST00000577906 ZNF579Q8NAF0 562 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms