RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ITGB2P05107 769 aa7.25□□□□□ -1.25
CHD9-211ENST00000564600 MAP3K10Q02779 954 aa7.25□□□□□ -1.25
CHD9-211ENST00000564600 RIPOR1Q6ZS17 1223 aa7.25□□□□□ -1.25
CHD9-211ENST00000564600 DZIP3Q86Y13 1208 aaKnown RBP7.25□□□□□ -1.25
CHD9-211ENST00000564600 ZNF837Q96EG3 531 aaPredicted RBP7.25□□□□□ -1.25
CHD9-211ENST00000564600 SRSF11Q05519 484 aaKnown RBP7.24□□□□□ -1.25
CHD9-211ENST00000564600 PPP2R2DQ66LE6 453 aa7.24□□□□□ -1.25
CHD9-211ENST00000564600 CDV3Q9UKY7 258 aaKnown RBP7.24□□□□□ -1.25
CHD9-211ENST00000564600 MEN1O00255 615 aa7.23□□□□□ -1.25
CHD9-211ENST00000564600 DBN1Q16643 649 aa7.23□□□□□ -1.25
CHD9-211ENST00000564600 PLA2G4EQ3MJ16 856 aa7.23□□□□□ -1.25
CHD9-211ENST00000564600 SCARF2Q96GP6 870 aaPredicted RBP7.23□□□□□ -1.25
CHD9-211ENST00000564600 IGF1RP08069 1367 aa7.22□□□□□ -1.25
CHD9-211ENST00000564600 NBPF20Q3BBV1 942 aa7.22□□□□□ -1.25
CHD9-211ENST00000564600 KANK3Q6NY19 840 aa7.22□□□□□ -1.25
CHD9-211ENST00000564600 GTPBP3Q969Y2 492 aaKnown RBP7.22□□□□□ -1.25
CHD9-211ENST00000564600 GAS2L1Q99501 681 aaPredicted RBP7.22□□□□□ -1.25
CHD9-211ENST00000564600 USP17L8P0C7I0 530 aa7.21□□□□□ -1.26
CHD9-211ENST00000564600 RFC5P40937 340 aa7.21□□□□□ -1.26
CHD9-211ENST00000564600 POU4F2Q12837 409 aa7.21□□□□□ -1.26
CHD9-211ENST00000564600 ACDQ96AP0 544 aa7.21□□□□□ -1.26
CHD9-211ENST00000564600 DCAF5Q96JK2 942 aa7.21□□□□□ -1.26
CHD9-211ENST00000564600 GOPCQ9HD26 462 aa7.21□□□□□ -1.26
CHD9-211ENST00000564600 GIGYF1O75420 1035 aaPredicted RBP7.2□□□□□ -1.26
CHD9-211ENST00000564600 XP32Q5T750 250 aa7.2□□□□□ -1.26
CHD9-211ENST00000564600 NEDD1Q8NHV4 660 aa7.2□□□□□ -1.26
CHD9-211ENST00000564600 ZC3H4Q9UPT8 1303 aaKnown RBP7.2□□□□□ -1.26
CHD9-211ENST00000564600 ESPNB1AK53 854 aa7.19□□□□□ -1.26
CHD9-211ENST00000564600 PCMTD1Q96MG8 357 aaPredicted RBP7.19□□□□□ -1.26
CHD9-211ENST00000564600 SPOCK3Q9BQ16 436 aa7.19□□□□□ -1.26
CHD9-211ENST00000564600 MBIPQ9NS73 344 aa7.19□□□□□ -1.26
CHD9-211ENST00000564600 ATP5J2-PTCD1G3V325 749 aa7.18□□□□□ -1.26
CHD9-211ENST00000564600 RNF144AP50876 292 aaPredicted RBP7.18□□□□□ -1.26
CHD9-211ENST00000564600 TRIM22Q8IYM9 498 aa7.18□□□□□ -1.26
CHD9-211ENST00000564600 PCDHB9Q9Y5E1 797 aa7.18□□□□□ -1.26
CHD9-211ENST00000564600 A0A1W2PRU2 124 aa7.17□□□□□ -1.26
CHD9-211ENST00000564600 MSTNO14793 375 aa7.17□□□□□ -1.26
CHD9-211ENST00000564600 IGHA1P01876 353 aa7.17□□□□□ -1.26
CHD9-211ENST00000564600 TRIM34Q9BYJ4 488 aa7.17□□□□□ -1.26
CHD9-211ENST00000564600 GPSM3Q9Y4H4 160 aa7.17□□□□□ -1.26
CHD9-211ENST00000564600 ADAM23O75077 832 aa7.16□□□□□ -1.26
CHD9-211ENST00000564600 PROCP04070 461 aa7.16□□□□□ -1.26
CHD9-211ENST00000564600 BCRP11274 1271 aa7.16□□□□□ -1.26
CHD9-211ENST00000564600 SCTRP47872 440 aa7.16□□□□□ -1.26
CHD9-211ENST00000564600 SNRPNP63162 240 aaKnown RBP7.16□□□□□ -1.26
CHD9-211ENST00000564600 RAB6BQ9NRW1 208 aa7.16□□□□□ -1.26
CHD9-211ENST00000564600 FOXK2Q01167 660 aa7.15□□□□□ -1.26
CHD9-211ENST00000564600 SLC27A3Q5K4L6 730 aa7.15□□□□□ -1.26
CHD9-211ENST00000564600 THBS1P07996 1170 aa7.14□□□□□ -1.27
CHD9-211ENST00000564600 GPAMQ9HCL2 828 aa7.14□□□□□ -1.27
CHD9-211ENST00000564600 ENAMQ9NRM1 1142 aa7.14□□□□□ -1.27
CHD9-211ENST00000564600 FBXO45P0C2W1 286 aa7.13□□□□□ -1.27
CHD9-211ENST00000564600 PHKA2P46019 1235 aa7.13□□□□□ -1.27
CHD9-211ENST00000564600 C1orf229Q6ZS94 237 aaPredicted RBP7.13□□□□□ -1.27
CHD9-211ENST00000564600 GALNT6Q8NCL4 622 aa7.13□□□□□ -1.27
CHD9-211ENST00000564600 ARHGEF10LQ9HCE6 1279 aa7.13□□□□□ -1.27
CHD9-211ENST00000564600 PHF20L1A8MW92 1017 aa7.12□□□□□ -1.27
CHD9-211ENST00000564600 SHISA8B8ZZ34 492 aa7.12□□□□□ -1.27
CHD9-211ENST00000564600 MX2P20592 715 aa7.12□□□□□ -1.27
CHD9-211ENST00000564600 NBPF10Q6P3W6 841 aaKnown RBP7.12□□□□□ -1.27
CHD9-211ENST00000564600 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
CHD9-211ENST00000564600 BEND7Q8N7W2 519 aaPredicted RBP7.12□□□□□ -1.27
CHD9-211ENST00000564600 GJD4Q96KN9 370 aaPredicted RBP7.12□□□□□ -1.27
CHD9-211ENST00000564600 KRBA1A5PL33 1030 aa7.11□□□□□ -1.27
CHD9-211ENST00000564600 FOXR1Q6PIV2 292 aa7.11□□□□□ -1.27
CHD9-211ENST00000564600 PODNQ7Z5L7 613 aa7.11□□□□□ -1.27
CHD9-211ENST00000564600 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
CHD9-211ENST00000564600 DYRK1BQ9Y463 629 aa7.11□□□□□ -1.27
CHD9-211ENST00000564600 STAU1O95793 577 aaKnown RBP7.1□□□□□ -1.27
CHD9-211ENST00000564600 CC2D2BQ6DHV5 1058 aa7.1□□□□□ -1.27
CHD9-211ENST00000564600 TRERF1Q96PN7 1200 aa7.1□□□□□ -1.27
CHD9-211ENST00000564600 GRIP2Q9C0E4 1043 aa7.1□□□□□ -1.27
CHD9-211ENST00000564600 NUCKS1Q9H1E3 243 aaKnown RBP7.1□□□□□ -1.27
CHD9-211ENST00000564600 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
CHD9-211ENST00000564600 ZBBXA8MT70 800 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 GPR37L1O60883 481 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 FURINP09958 794 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 TMEM259Q4ZIN3 620 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 OSBPL3Q9H4L5 887 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 SNRKQ9NRH2 765 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 PCDHB11Q9Y5F2 797 aa7.09□□□□□ -1.27
CHD9-211ENST00000564600 OIP5O43482 229 aa7.08□□□□□ -1.28
CHD9-211ENST00000564600 COL8A1P27658 744 aa7.08□□□□□ -1.28
CHD9-211ENST00000564600 SEPT12Q8IYM1 358 aa7.08□□□□□ -1.28
CHD9-211ENST00000564600 MTMR14Q8NCE2 650 aa7.08□□□□□ -1.28
CHD9-211ENST00000564600 PNMA1Q8ND90 353 aa7.08□□□□□ -1.28
CHD9-211ENST00000564600 OXCT2Q9BYC2 517 aaPredicted RBP7.08□□□□□ -1.28
CHD9-211ENST00000564600 SUV39H2Q9H5I1 410 aa7.08□□□□□ -1.28
CHD9-211ENST00000564600 RRAGCQ9HB90 399 aa7.08□□□□□ -1.28
CHD9-211ENST00000564600 H7C1W4 665 aa7.07□□□□□ -1.28
CHD9-211ENST00000564600 WASLO00401 505 aaPredicted RBP7.07□□□□□ -1.28
CHD9-211ENST00000564600 GPC1P35052 558 aa7.07□□□□□ -1.28
CHD9-211ENST00000564600 CLN3Q13286 438 aa7.07□□□□□ -1.28
CHD9-211ENST00000564600 IL2RAP01589 272 aa7.06□□□□□ -1.28
CHD9-211ENST00000564600 BAG6P46379 1132 aa7.06□□□□□ -1.28
CHD9-211ENST00000564600 TAS1R3Q7RTX0 852 aa7.06□□□□□ -1.28
CHD9-211ENST00000564600 KLRG1Q96E93 195 aa7.06□□□□□ -1.28
CHD9-211ENST00000564600 CDCA7Q9BWT1 371 aaPredicted RBP7.06□□□□□ -1.28
CHD9-211ENST00000564600 RUBCNLQ9H714 662 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms