RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 GOLGA3Q08378 1498 aa6.98□□□□□ -1.29
CAPN3-212ENST00000564503 SOCS7O14512 581 aa6.97□□□□□ -1.29
CAPN3-212ENST00000564503 GPR37L1O60883 481 aa6.97□□□□□ -1.29
CAPN3-212ENST00000564503 PPFIA3O75145 1194 aa6.97□□□□□ -1.29
CAPN3-212ENST00000564503 GIGYF1O75420 1035 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-212ENST00000564503 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.97□□□□□ -1.29
CAPN3-212ENST00000564503 SEPT12Q8IYM1 358 aa6.97□□□□□ -1.29
CAPN3-212ENST00000564503 ZNF395Q9H8N7 513 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-212ENST00000564503 CTSOP43234 321 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-212ENST00000564503 NR1H3Q13133 447 aa6.96□□□□□ -1.3
CAPN3-212ENST00000564503 INSM2Q96T92 566 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-212ENST00000564503 NDUFB9Q9Y6M9 179 aa6.96□□□□□ -1.3
CAPN3-212ENST00000564503 ADH1AP07327 375 aa6.95□□□□□ -1.3
CAPN3-212ENST00000564503 VSIG8P0DPA2 414 aa6.95□□□□□ -1.3
CAPN3-212ENST00000564503 PTSQ03393 145 aa6.95□□□□□ -1.3
CAPN3-212ENST00000564503 ERICH6Q7L0X2 663 aa6.95□□□□□ -1.3
CAPN3-212ENST00000564503 KDF1Q8NAX2 398 aaPredicted RBP6.95□□□□□ -1.3
CAPN3-212ENST00000564503 CYLDQ9NQC7 956 aa6.95□□□□□ -1.3
CAPN3-212ENST00000564503 STK17AQ9UEE5 414 aa6.95□□□□□ -1.3
CAPN3-212ENST00000564503 APBB1O00213 710 aa6.94□□□□□ -1.3
CAPN3-212ENST00000564503 PTGIRP43119 386 aa6.94□□□□□ -1.3
CAPN3-212ENST00000564503 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-212ENST00000564503 MCCD1P59942 119 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-212ENST00000564503 POLMQ9NP87 494 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-212ENST00000564503 CLSPNQ9HAW4 1339 aa6.93□□□□□ -1.3
CAPN3-212ENST00000564503 BAZ1BQ9UIG0 1483 aaKnown RBP6.92□□□□□ -1.3
CAPN3-212ENST00000564503 RNF20Q5VTR2 975 aa6.92□□□□□ -1.3
CAPN3-212ENST00000564503 CCDC125Q86Z20 511 aa6.92□□□□□ -1.3
CAPN3-212ENST00000564503 RNF217Q8TC41 542 aa6.92□□□□□ -1.3
CAPN3-212ENST00000564503 TRIM52Q96A61 297 aa6.92□□□□□ -1.3
CAPN3-212ENST00000564503 ZNF330Q9Y3S2 320 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-212ENST00000564503 SOGA1O94964 1423 aa6.92□□□□□ -1.3
CAPN3-212ENST00000564503 CEP164Q9UPV0 1460 aa6.92□□□□□ -1.3
CAPN3-212ENST00000564503 PEG3Q9GZU2 1588 aa6.91□□□□□ -1.3
CAPN3-212ENST00000564503 SLC35F4A4IF30 521 aa6.91□□□□□ -1.3
CAPN3-212ENST00000564503 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
CAPN3-212ENST00000564503 ZNF592Q92610 1267 aa6.91□□□□□ -1.3
CAPN3-212ENST00000564503 TIMELESSQ9UNS1 1208 aa6.91□□□□□ -1.3
CAPN3-212ENST00000564503 FOXD4L5Q5VV16 416 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-212ENST00000564503 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
CAPN3-212ENST00000564503 ZSCAN1Q8NBB4 408 aa6.9□□□□□ -1.3
CAPN3-212ENST00000564503 TBC1D2BQ9UPU7 963 aa6.9□□□□□ -1.3
CAPN3-212ENST00000564503 RUSC2Q8N2Y8 1516 aa6.9□□□□□ -1.31
CAPN3-212ENST00000564503 SYNJ1O43426 1573 aa6.9□□□□□ -1.31
CAPN3-212ENST00000564503 ATP5J2-PTCD1G3V325 749 aa6.89□□□□□ -1.31
CAPN3-212ENST00000564503 ERVK-9P63128 1117 aa6.89□□□□□ -1.31
CAPN3-212ENST00000564503 CC2D2BQ6DHV5 1058 aa6.89□□□□□ -1.31
CAPN3-212ENST00000564503 GPR161Q8N6U8 529 aaKnown RBP6.89□□□□□ -1.31
CAPN3-212ENST00000564503 BIVM-ERCC5R4GMW8 1640 aa6.89□□□□□ -1.31
CAPN3-212ENST00000564503 SCTRP47872 440 aa6.88□□□□□ -1.31
CAPN3-212ENST00000564503 NANOS1Q8WY41 292 aaKnown RBP6.88□□□□□ -1.31
CAPN3-212ENST00000564503 YTHDC1Q96MU7 727 aaKnown RBP6.88□□□□□ -1.31
CAPN3-212ENST00000564503 CEP126Q9P2H0 1117 aa6.88□□□□□ -1.31
CAPN3-212ENST00000564503 PCDHB11Q9Y5F2 797 aa6.88□□□□□ -1.31
CAPN3-212ENST00000564503 PRDM2Q13029 1718 aa6.87□□□□□ -1.31
CAPN3-212ENST00000564503 VPS8Q8N3P4 1428 aa6.87□□□□□ -1.31
CAPN3-212ENST00000564503 SENP3-EIF4A1A0A087X0R7 540 aa6.87□□□□□ -1.31
CAPN3-212ENST00000564503 A0A1W2PRU2 124 aa6.87□□□□□ -1.31
CAPN3-212ENST00000564503 RANGAP1P46060 587 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-212ENST00000564503 RNF144AP50876 292 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-212ENST00000564503 IRF5Q13568 498 aa6.87□□□□□ -1.31
CAPN3-212ENST00000564503 LYSMD3Q7Z3D4 306 aa6.87□□□□□ -1.31
CAPN3-212ENST00000564503 PRM3Q9NNZ6 103 aa6.87□□□□□ -1.31
CAPN3-212ENST00000564503 TTBK1Q5TCY1 1321 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-212ENST00000564503 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
CAPN3-212ENST00000564503 MEN1O00255 615 aa6.86□□□□□ -1.31
CAPN3-212ENST00000564503 ITGA6P23229 1130 aa6.86□□□□□ -1.31
CAPN3-212ENST00000564503 PRICKLE2Q7Z3G6 844 aa6.86□□□□□ -1.31
CAPN3-212ENST00000564503 VWA5B2Q8N398 1253 aa6.86□□□□□ -1.31
CAPN3-212ENST00000564503 TRAK2O60296 914 aa6.85□□□□□ -1.31
CAPN3-212ENST00000564503 UBTFP17480 764 aaKnown RBP6.85□□□□□ -1.31
CAPN3-212ENST00000564503 KRT76Q01546 638 aa6.85□□□□□ -1.31
CAPN3-212ENST00000564503 CCDC85AQ96PX6 553 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-212ENST00000564503 OSBPL3Q9H4L5 887 aa6.85□□□□□ -1.31
CAPN3-212ENST00000564503 ESF1Q9H501 851 aaKnown RBP6.85□□□□□ -1.31
CAPN3-212ENST00000564503 GDPD2Q9HCC8 539 aa6.85□□□□□ -1.31
CAPN3-212ENST00000564503 CLIP1P30622 1438 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 RHOQP17081 205 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 GPC1P35052 558 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 EIF4G2P78344 907 aaKnown RBP eCLIP6.84□□□□□ -1.31
CAPN3-212ENST00000564503 SV2AQ7L0J3 742 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 CYP2U1Q7Z449 544 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 NLRP3Q96P20 1036 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 CDCA7Q9BWT1 371 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-212ENST00000564503 COL25A1Q9BXS0 654 aaPredicted RBP6.84□□□□□ -1.31
CAPN3-212ENST00000564503 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
CAPN3-212ENST00000564503 TOP2BQ02880 1626 aa6.83□□□□□ -1.32
CAPN3-212ENST00000564503 ERICH3Q5RHP9 1530 aa6.83□□□□□ -1.32
CAPN3-212ENST00000564503 CDC14CA4D256 554 aa6.83□□□□□ -1.32
CAPN3-212ENST00000564503 CLN3Q13286 438 aa6.83□□□□□ -1.32
CAPN3-212ENST00000564503 TSGA10IPQ3SY00 556 aa6.83□□□□□ -1.32
CAPN3-212ENST00000564503 PHTF2Q8N3S3 785 aa6.83□□□□□ -1.32
CAPN3-212ENST00000564503 ABL2P42684 1182 aa6.82□□□□□ -1.32
CAPN3-212ENST00000564503 VAC14Q08AM6 782 aa6.82□□□□□ -1.32
CAPN3-212ENST00000564503 RNFT1Q5M7Z0 435 aa6.82□□□□□ -1.32
CAPN3-212ENST00000564503 GRIP2Q9C0E4 1043 aa6.82□□□□□ -1.32
CAPN3-212ENST00000564503 CUEDC1Q9NWM3 386 aaPredicted RBP6.82□□□□□ -1.32
CAPN3-212ENST00000564503 POU4F2Q12837 409 aa6.81□□□□□ -1.32
CAPN3-212ENST00000564503 SLC27A3Q5K4L6 730 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms