RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
CAPN3-212ENST00000564503 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
CAPN3-212ENST00000564503 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
CAPN3-212ENST00000564503 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
CAPN3-212ENST00000564503 FOXD1Q16676 465 aa15.89■□□□□ 0.13
CAPN3-212ENST00000564503 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
CAPN3-212ENST00000564503 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
CAPN3-212ENST00000564503 ADRA2BP18089 450 aa15.01□□□□□ -0.01
CAPN3-212ENST00000564503 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
CAPN3-212ENST00000564503 MSH5O43196 834 aa14.75□□□□□ -0.05
CAPN3-212ENST00000564503 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
CAPN3-212ENST00000564503 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
CAPN3-212ENST00000564503 SCAF1Q9H7N4 1312 aaKnown RBP13.71□□□□□ -0.21
CAPN3-212ENST00000564503 PPP4R3CPQ6ZMV5 832 aa13.62□□□□□ -0.23
CAPN3-212ENST00000564503 DMRT2Q9Y5R5 561 aa13.57□□□□□ -0.24
CAPN3-212ENST00000564503 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
CAPN3-212ENST00000564503 HOXD11P31277 338 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-212ENST00000564503 NCBP3Q53F19 620 aaKnown RBP13.15□□□□□ -0.3
CAPN3-212ENST00000564503 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-212ENST00000564503 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
CAPN3-212ENST00000564503 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
CAPN3-212ENST00000564503 KCNA4P22459 653 aa12.93□□□□□ -0.34
CAPN3-212ENST00000564503 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
CAPN3-212ENST00000564503 RNF39Q9H2S5 420 aa12.63□□□□□ -0.39
CAPN3-212ENST00000564503 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-212ENST00000564503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.54□□□□□ -0.4
CAPN3-212ENST00000564503 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
CAPN3-212ENST00000564503 SLC4A2P04920 1241 aa12.34□□□□□ -0.43
CAPN3-212ENST00000564503 U3KPZ7 1027 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-212ENST00000564503 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
CAPN3-212ENST00000564503 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-212ENST00000564503 CAPN15O75808 1086 aa12.02□□□□□ -0.49
CAPN3-212ENST00000564503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-212ENST00000564503 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
CAPN3-212ENST00000564503 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-212ENST00000564503 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
CAPN3-212ENST00000564503 APLP2Q06481 763 aa11.96□□□□□ -0.49
CAPN3-212ENST00000564503 SAMD1Q6SPF0 538 aaPredicted RBP11.96□□□□□ -0.49
CAPN3-212ENST00000564503 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-212ENST00000564503 DSG3P32926 999 aa11.9□□□□□ -0.5
CAPN3-212ENST00000564503 ZBTB22O15209 634 aa11.89□□□□□ -0.51
CAPN3-212ENST00000564503 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-212ENST00000564503 ABCB7O75027 752 aa11.77□□□□□ -0.53
CAPN3-212ENST00000564503 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
CAPN3-212ENST00000564503 POLA2Q14181 598 aa11.64□□□□□ -0.55
CAPN3-212ENST00000564503 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
CAPN3-212ENST00000564503 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
CAPN3-212ENST00000564503 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.57
CAPN3-212ENST00000564503 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-212ENST00000564503 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
CAPN3-212ENST00000564503 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
CAPN3-212ENST00000564503 FBLN2P98095 1184 aa11.21□□□□□ -0.61
CAPN3-212ENST00000564503 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-212ENST00000564503 AKT1S1Q96B36 256 aa11.14□□□□□ -0.63
CAPN3-212ENST00000564503 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
CAPN3-212ENST00000564503 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
CAPN3-212ENST00000564503 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
CAPN3-212ENST00000564503 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
CAPN3-212ENST00000564503 POTEHQ6S545 545 aa11.03□□□□□ -0.64
CAPN3-212ENST00000564503 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
CAPN3-212ENST00000564503 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-212ENST00000564503 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
CAPN3-212ENST00000564503 PITPNM1O00562 1244 aa10.91□□□□□ -0.66
CAPN3-212ENST00000564503 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
CAPN3-212ENST00000564503 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
CAPN3-212ENST00000564503 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
CAPN3-212ENST00000564503 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
CAPN3-212ENST00000564503 FXR2P51116 673 aaKnown RBP eCLIP10.78□□□□□ -0.68
CAPN3-212ENST00000564503 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
CAPN3-212ENST00000564503 PRR29P0C7W0 189 aa10.65□□□□□ -0.7
CAPN3-212ENST00000564503 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
CAPN3-212ENST00000564503 CHADLQ6NUI6 762 aa10.57□□□□□ -0.72
CAPN3-212ENST00000564503 STAG3Q9UJ98 1225 aa10.57□□□□□ -0.72
CAPN3-212ENST00000564503 HAX1O00165 279 aa10.55□□□□□ -0.72
CAPN3-212ENST00000564503 PROM2Q8N271 834 aa10.53□□□□□ -0.72
CAPN3-212ENST00000564503 EVX2Q03828 476 aa10.46□□□□□ -0.73
CAPN3-212ENST00000564503 FKBP8Q14318 412 aa10.45□□□□□ -0.74
CAPN3-212ENST00000564503 SP7Q8TDD2 431 aaPredicted RBP10.45□□□□□ -0.74
CAPN3-212ENST00000564503 CREBZFQ9NS37 354 aa10.44□□□□□ -0.74
CAPN3-212ENST00000564503 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-212ENST00000564503 C19orf67A6NJJ6 358 aa10.43□□□□□ -0.74
CAPN3-212ENST00000564503 CD44P16070 742 aaKnown RBP10.3□□□□□ -0.76
CAPN3-212ENST00000564503 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
CAPN3-212ENST00000564503 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
CAPN3-212ENST00000564503 MIER1Q8N108 512 aa10.25□□□□□ -0.77
CAPN3-212ENST00000564503 GABBR2O75899 941 aa10.22□□□□□ -0.77
CAPN3-212ENST00000564503 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
CAPN3-212ENST00000564503 PLEKHG5O94827 1062 aa10.19□□□□□ -0.78
CAPN3-212ENST00000564503 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
CAPN3-212ENST00000564503 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
CAPN3-212ENST00000564503 PAK3O75914 559 aaPredicted RBP10.15□□□□□ -0.78
CAPN3-212ENST00000564503 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
CAPN3-212ENST00000564503 CLCN6P51797 869 aa10.11□□□□□ -0.79
CAPN3-212ENST00000564503 PHF12Q96QT6 1004 aa10.08□□□□□ -0.8
CAPN3-212ENST00000564503 TSPYL2Q9H2G4 693 aaPredicted RBP10.08□□□□□ -0.8
CAPN3-212ENST00000564503 ZBTB47Q9UFB7 747 aaPredicted RBP10.07□□□□□ -0.8
CAPN3-212ENST00000564503 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
CAPN3-212ENST00000564503 VASPP50552 380 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-212ENST00000564503 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-212ENST00000564503 NUBP1P53384 320 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms